Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1667 ATGGCCTCTCCTGATGAGACAGAGAGGAGTGTGGCAAAAAAACTTAGATATTTGGGGAGGAAGCTCCTCAAGGGCTCTTCAGTTCACAAGCTTATGCAGCTGCTTCATAAATTGGAGCTTGTATTATCAACCGTGGATCAAGAACCAAGTAAGCCAATTCAAGAATCACTTGTACCTTCCATGAAGGCATTGATTTCAGATGAACTTTTGAGGCACACAGATGAGAATGTTAAGATTCTAGTTATATCTTGCCTCTCTGAGATTACAAGAATCACAGCGCCAGATGCCCCTTATGATGATGAACAAATGAAGGAAATCTTCAAGCTCACCGTGGCATCTTTTGAGAAGTTGTCTCACATATCTGGCTGTGGCTATGAAAAAGCGCTTACCCTACTTGATAATGTCAATAAGGTCAGATTATGCTTGGTCATGCTGGACCTTGAGTGTAATGACCTGGTTATTGAAATGTTTCAGCATTTCTTGAGATTTATAAGGTCAAATCATCCGTGTCATGCATTTCATTCAATGGAATCAATAATGACCTTGATCTTACAAGAAAGTGAACAAATTTCCCTGGATCTTCTTAGACCTCTGTTGGATAGTGTAGGAAATGAAAATCAGACTATTTCACCTATGTCTTGGACATTGGGTGAGAAAGTAATCAGAAACTGTACTGCCAAGCTCAAGCCTTATCTCATGAAGGCAGTGGAGTCCTCAGGCAGAGCTCTAAATGAGTATGCACAGATAGTAACTGATATTTGCCAGAATGAATCTGAATCCCCCCAACGCGATGATGCAAATGGTTCTAAGAAGACAGTGGCTCAGGAAGCTGGTAACAAGCTTAATGTTCCTAAAGAAGCAAAGGAACAGCCATATGATGAAACCGAGGGTCATGAACCCGATGATTCTAGTAAGAGAGATGTCCAAATTTTGGATGATACAAAGTCAAACAGAAGGGACACTATGGATGAAGTTATAAAAAAAACTGGTTCAAAAAGGAGATCTCGTTCTGAAATTACCAAGAAATCTGAAAGAGGGAGTGCAAAAGCCAAGTTGGAAACTGACAATGTAGAGTCTGTTCAGGAACCAAAATCAGAAACTCAGCTGAATACTGTGTCAAGGAAGAGGGGGCGTAAGCCAAATTCTCTAATGAATGCAGAAGAAGGCTATGATCACTCGTGGATTTATCGGGAAACTGAAGTGGAAAAATCAACACTGTCCAGAAAGACTCGTGAATCCAAGTCTCCTTTTCCATCTTCTGAAAAGCCTACTTCCAGAAAAGATAAGTTGCATCAAAAGCCTAAATCTGTAAGTGAAACTCTAGTTTGTAAGCCGAAAAGTGAGAACATAGCAAAACCTGCCAAATCCAGAAGGACTCACAATATTGGCAATGATACAAGTAAAGGTTGTGAAGCTTTAGCTTCTAAACCTAAAACTAATGGTAATACTGATCCTTCTCCTTCTATAAATAATGCTATTTCTGATGGTCATATCAAACGAGGTCGGAGAAGGAAATTAAATAGCACAGGGAATCAAGATGTTCATTCCAATTCTTTGTCAATGTTAAAAGACAACTTGAATTGTCTGCCTGAGAAGATTTCTCTGGATTCCCCAACAGTTAGGTTGGTAAAGGAATCTGAAGTAAGGAATATCTCTGAACAAAAACCCATTAGGAAAATCAAATTTTCTGTAAAGATTGATGGAAAACTTGTCATGGGCCCAGAATCAGCTGCTAATAGGGAGCCTAACGTTTCATGTGGAGATGAGGGGAAACACAAGTCATCTATGAATGATGAGCTAGAAAATATTAAAGAGGGCAGATTCTCAACTCAAACAAATGTTAGGAAAAGGAGGAGGCTTGATGCTACTCCTAAAGAGGGCCTCTACAAATCATCAGCTGTGAAGGAGCTGATTGCAGAATCTGCAAGTAAAACATTAAATGGTGTCAAGGAAACCTTACAAGCAAGGCTGAGGAGAAGACACAGTAATGTGAATGCTGAGGCATCTGAATCTCATCATGGTAATTCATTTGTTGGTAGTAGAATCAAGGTATGGTGGCCAAAAGATAAGACGTTTTATGAAGGTGTTATCGAATCTTATGATCCTATCAAAGGAAAGCACAAGATTTTGTATGCGGATGGTGATGTTGAAGTGTTGAACCTCAAAAGACAGCGTTGGAAACTAGTTGATGCTTCGTTAGACGAGGAAGGGCTTGCACTTCAGAGGCTCCCAGAAGCATCGGACGTATCAGAAAAAGGCAAGGGAAAATCAAAGTTGGAGTCATCCAAAGCTGCAACTATCAAATCTCAGTCCAGAAAAGACTCCAAGAAGCCTAAAAACCGAAAGAGGGACAGCTAA 2358 0.4012 MASPDETERSVAKKLRYLGRKLLKGSSVHKLMQLLHKLELVLSTVDQEPSKPIQESLVPSMKALISDELLRHTDENVKILVISCLSEITRITAPDAPYDDEQMKEIFKLTVASFEKLSHISGCGYEKALTLLDNVNKVRLCLVMLDLECNDLVIEMFQHFLRFIRSNHPCHAFHSMESIMTLILQESEQISLDLLRPLLDSVGNENQTISPMSWTLGEKVIRNCTAKLKPYLMKAVESSGRALNEYAQIVTDICQNESESPQRDDANGSKKTVAQEAGNKLNVPKEAKEQPYDETEGHEPDDSSKRDVQILDDTKSNRRDTMDEVIKKTGSKRRSRSEITKKSERGSAKAKLETDNVESVQEPKSETQLNTVSRKRGRKPNSLMNAEEGYDHSWIYRETEVEKSTLSRKTRESKSPFPSSEKPTSRKDKLHQKPKSVSETLVCKPKSENIAKPAKSRRTHNIGNDTSKGCEALASKPKTNGNTDPSPSINNAISDGHIKRGRRRKLNSTGNQDVHSNSLSMLKDNLNCLPEKISLDSPTVRLVKESEVRNISEQKPIRKIKFSVKIDGKLVMGPESAANREPNVSCGDEGKHKSSMNDELENIKEGRFSTQTNVRKRRRLDATPKEGLYKSSAVKELIAESASKTLNGVKETLQARLRRRHSNVNAEASESHHGNSFVGSRIKVWWPKDKTFYEGVIESYDPIKGKHKILYADGDVEVLNLKRQRWKLVDASLDEEGLALQRLPEASDVSEKGKGKSKLESSKAATIKSQSRKDSKKPKNRKRDS* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1667 785 MobiDBLite consensus disorder prediction 282 360 - -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 476 493 - -
Pvu10g1667 785 Pfam Sister chromatid cohesion protein PDS5 protein 30 233 - -
Pvu10g1667 785 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 12 781 IPR039776 GO:0007064
Pvu10g1667 785 SUPERFAMILY Tudor/PWWP/MBT 675 716 - -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 747 773 - -
Pvu10g1667 785 CDD TUDOR 679 725 IPR002999 -
Pvu10g1667 785 SUPERFAMILY ARM repeat 41 256 IPR016024 -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 391 435 - -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 450 464 - -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 257 518 - -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 361 378 - -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 575 597 - -
Pvu10g1667 785 MobiDBLite consensus disorder prediction 740 785 - -
Pvu10g1667 785 Gene3D - 669 723 - -
Pvu10g1667 785 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 12 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1667 Pvu-Chr10 42875943 42885074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1667 - - vra:106773633 1229.54