Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1665 ATGCCGCTGATTTTACCCAAAAGCGATTCGATCCAGATTCGCGAGGTGTGGAACGATAACCTGGAAGAGGAATTCGCGTTGATTCGCGAAATCGTGGACGATTACCCGTACATCGCGATGGACACGGAGTTTCCGGGGATTGTTCTCCGACCGGTGGGGAATTTCAAGAACAGCTACGATTACCATTACCAAACCCTAAAGGACAACGTAGACATGCTAAAGCTCATACAATTGGGGCTCACCTTCTCCGACGAGTACGGCAACCTTCCCACGTGTGCCGGCGCAGGGGATGTCGACGAGGAATCGCATTCGTGCTGCATCTGGCAATTCAATTTCCGGGAGTTCAACGTGAACGAGGACGTCTTCGCGAACGATTCCATCGAGCTTTTGCGCCAGAGCGGGATCGATTTCAAGAAGAACAACGAGGACGGCATCGACGCGCACCGTTTCGGGGAGCTTCTCATGTCGTCCGGGATCGTTTTGAATGACAACGTTCATTGGGTTACTTTCCATAGCGGTTACGATTTCGGGTACTTGTTGAAGCTCTTGACGTGTCAGAATTTGCCCGATACGCAGGTGGAGTTCTTCAATCTGATCAACATGTATTTTCCCACCGTATATGACATCAAGCACCTCATGAAGTTCTGCAACAGCCTTCACGGCGGTTTGAACAAGCTTGCCGAGTTGTTGGAGGTCGAGAGGATTGGGATTTGCCATCAGGCGGGTTCCGATAGTTTGCTTACTTCGTGTACGTTCAGGAAATTGAAGGACAATTTCTTTAGTGGCTCTTTGGAGAAGTATGCTGGTGTCTTGTATGGGTTAGGTGTTGAGAATGGACAGGGAGCCCATTGA 852 0.5 MPLILPKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEYGNLPTCAGAGDVDEESHSCCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNNEDGIDAHRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERIGICHQAGSDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGAH* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1665 283 Pfam CAF1 family ribonuclease 168 228 IPR006941 -
Pvu10g1665 283 Pfam CAF1 family ribonuclease 16 145 IPR006941 -
Pvu10g1665 283 SUPERFAMILY Ribonuclease H-like 4 276 IPR012337 -
Pvu10g1665 283 Gene3D - 1 278 IPR036397 GO:0003676
Pvu10g1665 283 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4 282 IPR039637 GO:0004535|GO:0030014
Pvu10g1665 283 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 4 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1665 Pvu-Chr10 42869557 42871284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1665 K12581 - gmx:100789409 548.125