Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1664 ATGGAACCTATACAGCGCCAACACAGAACTTCTATGGACTACAGCTCCGAAGAAGATTCAGATATAAGTGAATCTGAGATTTATGACTACTCAGAGAAACCATATGAACTGTTAAGGGCTGGAAAATACAAGGTTAAAAATTTGAATGGAACTCTTAGATGCCCTTACTGTGCAGGGAAGAAAAAACAAGACTACAAATATAAGGATTTATTGCAACATGCATCTGGAGTTGGTAAGGGTTCTGCTAACAGAAGTGCAAAACAAAAGGCAAACCACCTTGCTCTAGCAAAGTATTTGGAGACTGATCTAGCTAGTGAAGCAGAGCCGATCCAGAACCCAGCTTTACCCCAAGCTGTTAATCAACCTTCACAGCAAGAAGATCTTTATTATGTTTGGCCCTGGACAGGCATAATTGTTAACATAAAGGGTAAATCCATTGATTCTAGACACTGGTTGAAGGAATTTGCTCAATTCAGACCAAATGATTTCCATATATTCATGAAAGATGGTGACATGACAGCTCAAGCTGTAATGGACTTCAACAAAGACTGGAATGGTTTCATAAATGCAAGTGAATTTGAGAAGTCTTTTGAAACAGCACGTCATTGTAAAAAGGATTGGAGCTCAAGGAAGTTAGATGACTCAAATATTTATGGATGGGTTGCACGAGAAGATGATTATAATTGTGGAGGGCCAATAGGGGAATACCTCCGCAACAAAGGAACGTTGAGGACAGTTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGTATTGTGACAAACCTAACTAAAGAAATTGAGTTAACAAATGAAAACCTTGATAAAATGCAGTCTAAGTTTAATGAGAGGACTATGTCCTTGAGTAGGATGCTTGAGGAGAAAGATAAGCTTCACAATGCTTTTGAAGAAGAATCAAGGAATATGCAGCGTAAAGCACGTAACGAGGTACGGCGGATCTTGGACGAGCAAGAAAAATTGAGTAGTGAATTGGATGATAAGAGGCGGAAGCTTGATTCTTGGAGTAGAGATCTGAACAAGAGAGAGGTACTAACTGATCAAGAGAGGCAGAAACTTGCAGAGGACAAGAAGAAGAAAGATTTGAGGAATGAATCACTCCTGTTGGCTTCAAAAGAACAGAAGATAGCGGATGAAAATGTCTTAAGGCTTGTTGAAGAGCAGAAGAGAGAGAAAGAGGAGGCCTATAACAAGATACTTCTGCTGGAAAAACAGCTTGATGCGAAACAGAAATTGGAAATGGAAATTGAAGAGCTAAAAGGTAAATTGCAAGTTATGAAGCATCTTGGAGATGAAGATGATACAGCTGTTCAGAAGAAGATAAAAGAAATGAATGATGAATTGCAAGAAAAAATAGAGAATTTGGAATCTGTGGAGACCATGAATCAAACCCTCATTGTGAAGGAGCGCCAGAGTAATGATGAACTGCAGGAAGCTCGCAAAGAATTAATAAAAGGGTTAGAGGATATGCTTAATGGTCCTAGAAGTAATATTGGGCTCAAGAGAATGGGAGAGCTTGATCAGAATGTTTTTGTCGCTAAATGCAAGGAAAGATTTTCTCCTGAAGAATATGGGACCAAAGGTGTCGAGCTTTGCTCTTTGTGGCAGGAAAACGTGAAGAATTCTGCTTGGCATCCATTTAAAGTGGTCGTGGTTGATAATAACCCAGAGAATAGCATAGACGAGAATGATGACAAGTTACGAAGCCTCAAGCAGGAATGGGGAGATGAGATATATTCAGCTGTGGTAACAGCCTTAACAGAAATAAATGAATACAACGCAAGCGGTGGGTATACTGTTGTGGAGCTATGGAACTTCAAGGAAAAAAGAAAGGCTACGTTGAAAGAAGTTATCACTTATATTATGGATCGTATCAAGCCAAATAAGCGCAAGAGAGGATAG 1923 0.3926 MEPIQRQHRTSMDYSSEEDSDISESEIYDYSEKPYELLRAGKYKVKNLNGTLRCPYCAGKKKQDYKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLETDLASEAEPIQNPALPQAVNQPSQQEDLYYVWPWTGIIVNIKGKSIDSRHWLKEFAQFRPNDFHIFMKDGDMTAQAVMDFNKDWNGFINASEFEKSFETARHCKKDWSSRKLDDSNIYGWVAREDDYNCGGPIGEYLRNKGTLRTVSDIVQEASESRNSIVTNLTKEIELTNENLDKMQSKFNERTMSLSRMLEEKDKLHNAFEEESRNMQRKARNEVRRILDEQEKLSSELDDKRRKLDSWSRDLNKREVLTDQERQKLAEDKKKKDLRNESLLLASKEQKIADENVLRLVEEQKREKEEAYNKILLLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDTAVQKKIKEMNDELQEKIENLESVETMNQTLIVKERQSNDELQEARKELIKGLEDMLNGPRSNIGLKRMGELDQNVFVAKCKERFSPEEYGTKGVELCSLWQENVKNSAWHPFKVVVVDNNPENSIDENDDKLRSLKQEWGDEIYSAVVTALTEINEYNASGGYTVVELWNFKEKRKATLKEVITYIMDRIKPNKRKRG* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1664 640 Coils Coil 289 345 - -
Pvu10g1664 640 Pfam XS domain 130 228 IPR005380 GO:0031047
Pvu10g1664 640 MobiDBLite consensus disorder prediction 1 16 - -
Pvu10g1664 640 Coils Coil 445 489 - -
Pvu10g1664 640 Pfam XS zinc finger domain 54 96 IPR005381 GO:0031047
Pvu10g1664 640 Gene3D XS domain 123 283 IPR038588 -
Pvu10g1664 640 PANTHER RIBONUCLEASE P SUBUNIT P38 15 639 IPR045177 GO:0080188
Pvu10g1664 640 Coils Coil 392 436 - -
Pvu10g1664 640 MobiDBLite consensus disorder prediction 1 26 - -
Pvu10g1664 640 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 15 639 - -
Pvu10g1664 640 Pfam XH domain 508 638 IPR005379 -
Pvu10g1664 640 Coils Coil 261 281 - -
Pvu10g1664 640 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1664 Pvu-Chr10 42862345 42867510 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1664 - - gmx:100798940 1076.62