Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1657 ATGCGACGCTCTTCTGCATCCAAAAAGACGGGTCAATCCTATTCCACTCCCACCGCCACCGATCTCTTCCGCTCCGCTTCAAGTAAGGCAAGCTCGAAGGAGTCTGAACGAATTGATAGTCTATTCTATTCATTTGCTAATGCGTCTACTGGGATGATTGACCCAGAGGGAATTGAAACACTTTGTGCTGCTATGGAGGTTAATCATACAGATGTAAGGGTTTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGCTATTTTACATTGGACGAGTGGAGGAGAGGCTTAAAAGCATTAAGGGCCGATACAGTTAGTAAATTGAAGAAGGCACTTCCAGAGCTAGAAAAAGAGGTCAGGAGGCCATCAAACTTTGCAGATTTCTATACATATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGCGAGTTACTTACTCTTGTTTTGGGTTCAGCATTTCCTCCCCAAGTCAACTCATTTGTGGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGGTTTTTCCGCTTTTGCAACGAGATAAGTTATCCAACCCTTAATGACTATGATGCTGAGCTTGCCTGGCCCTTGATCCTGGACAATTTCGTTGAATGGGTGCGAGAAAAGGAAAATTAA 687 0.4207 MRRSSASKKTGQSYSTPTATDLFRSASSKASSKESERIDSLFYSFANASTGMIDPEGIETLCAAMEVNHTDVRVLMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPELEKEVRRPSNFADFYTYAFQYCLTEEKQKSIDIESICELLTLVLGSAFPPQVNSFVEYLKTQNDYKVINMDQWMGFFRFCNEISYPTLNDYDAELAWPLILDNFVEWVREKEN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1657 228 Gene3D Cullin, PONY binding domain 123 228 IPR042460 -
Pvu10g1657 228 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 1 227 - -
Pvu10g1657 228 ProSiteProfiles DCUN1 domain profile. 33 224 IPR005176 -
Pvu10g1657 228 Gene3D - 31 121 - -
Pvu10g1657 228 PANTHER RP42 RELATED 1 227 IPR014764 -
Pvu10g1657 228 SUPERFAMILY EF-hand 25 193 IPR011992 -
Pvu10g1657 228 Pfam Cullin binding 108 222 IPR005176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1657 Pvu-Chr10 42813328 42818170 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1657 K17824 - gmx:100499856 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1657 10 42813328 42818170 Pvu10g1657 10 42813328 42818170 ECH