Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1653 ATGTCAGAAAAAGAAGAAGAAGAAGATTTAGATTTGCCTGATGAATGCTGGGAATTGGTGTTCAAATTCCTCAAACCCAATCCTCATTTTGAACCTCTCTCTCTTGTCTCAACCCAATTCCTCTCCATAACCAATCTCCTTCGAACCTCACTCACCATAACCAACCCAACAATTCCCTTTCTCCCCAACCTCTTCCTAAGGTTCCCCTGCATCACCTCTCTTCACCTCACGCGCCGCCTCCACCACTCCCACCTCCACGCGCTCCTCATCCAACTCTCACGCGCCGCCCCACCTCTCCAATCTCTCACCCTCTCCGGCCACCCCTCCATCCCCTCAAATGGGTTGCGCGCGTTCGCCAGAAAGATCCCAACTTTGAAATCCCTCACCTGCTCCCACATGGGTTTTCTCCGAAACGCCGATCTCCTTCTGATCGCTGATTGTTTCCCTTTCCTCGAACATCTCGACCTCAGCTTCCCCGAAAACAGCGACAACTCCACAGTTTCCGATTTCGGCGTAAAGGCTCTGTCTTTGGCCCTGCCCAGGCTTCGCAGCGTTAACCTCTCCGGCAATTTCTTCATCAATGACCTTTCCATTCTCAGTCTCTGCAAGAACTGCGAGCTTCTCGAGGAAGTTATAATCTTTGAGTGCCATTTCATCACGCAACGCGGCATCGCTTGCGCGATTCGCGAAAGACCGTGTTTGCGTTCTTTCTGCGTTAGCAATTTCGGGTGTGGAACAAAGAAGGGTGACATTGGCAGACCCTATGCGACTTCTGATTTCATCACTGCGTTGGTGGGTTTGAAGGGCTTGACTTGTCTCGATTTGTCGTGTTCTTCTATCTCCGACGAGTTGCTATGCTGTGTTGCGGAAGAAGGGATTCCTCTGAAGAAGCTTGTTTTACAAGGTTCTTGTAACTACAGTTACCTTGGAGTGTTGTGCTTGTTGTCCACGTGTCAGTCTGTGGAGCATTTAGATCTTCAGAACGCTGAGTTTCTGTGTGATCAGCGTGTGGAAGAGTTGTGTGAGTTTCTTGGGAATTTGGTGTCTATAAATGTTAGTGGTTGTAGGATGTTAACTGATTTGGCTTTGTTTGAACTCGTTAGGAAGTGTCCTTTGTTGAATGAGATCAAAATGGAGGCAACAGATGTTGGAAAGAAGGGGGTTGATGATGAGTTTGTGAATGGTGTTGTGAATTATCGGGTGAAGTCTCTCTATTTGGGAAGCAATTCCTGGTTGAGGGATGAAAGTGTTGAAATGATTGCTTCTCTTTGCCCCAGTTTGGAGGTGCTTGATTTGAGTTCTTGCTGTGGAATATCTGAAGGTGTTGTGGAGGTTTTAAGGAGGTGTGGTGAGGTTAGGAATTTGAGCTTGGCCTTTTGTTCGGGAGTGAAGTTCACAGGGCTGGACTTTGAAGTTCCAAAACTTGAGGAGTTGAACTTGTCACGATCAGGAGTTGATGATGAAATGCTTTCTGTGATCTCAAAGTGCTGTCGTTGGTTGCTTCATTTGGACTTGGAAAATTGCTCTGGTGTCACAACCAAGGGAGTTAGGGAAGTGGTGGAGAAGTGCACGCGATTGAGGGAGATTAATTTGGTGTCTTGTTGTGAAGTTGGAGCTAGTGTTGTTGCTTGGATGGTATTTTCAAGGCCATCATTGAGAAGGATAATGCCACCCCCAAGTTTTGATCTCAGTGGTGGCCAGAAGGAACTCCTCTTGCGTCATGGGTGCATTGTTAGCTTGTAG 1743 0.4745 MSEKEEEEDLDLPDECWELVFKFLKPNPHFEPLSLVSTQFLSITNLLRTSLTITNPTIPFLPNLFLRFPCITSLHLTRRLHHSHLHALLIQLSRAAPPLQSLTLSGHPSIPSNGLRAFARKIPTLKSLTCSHMGFLRNADLLLIADCFPFLEHLDLSFPENSDNSTVSDFGVKALSLALPRLRSVNLSGNFFINDLSILSLCKNCELLEEVIIFECHFITQRGIACAIRERPCLRSFCVSNFGCGTKKGDIGRPYATSDFITALVGLKGLTCLDLSCSSISDELLCCVAEEGIPLKKLVLQGSCNYSYLGVLCLLSTCQSVEHLDLQNAEFLCDQRVEELCEFLGNLVSINVSGCRMLTDLALFELVRKCPLLNEIKMEATDVGKKGVDDEFVNGVVNYRVKSLYLGSNSWLRDESVEMIASLCPSLEVLDLSSCCGISEGVVEVLRRCGEVRNLSLAFCSGVKFTGLDFEVPKLEELNLSRSGVDDEMLSVISKCCRWLLHLDLENCSGVTTKGVREVVEKCTRLREINLVSCCEVGASVVAWMVFSRPSLRRIMPPPSFDLSGGQKELLLRHGCIVSL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1653 580 SUPERFAMILY RNI-like 258 545 - -
Pvu10g1653 580 PANTHER NODULIN-LIKE PROTEIN 403 549 - -
Pvu10g1653 580 PANTHER NODULIN-LIKE PROTEIN 9 230 - -
Pvu10g1653 580 SUPERFAMILY RNI-like 10 288 - -
Pvu10g1653 580 PANTHER UNCHARACTERIZED 9 230 - -
Pvu10g1653 580 PANTHER UNCHARACTERIZED 403 549 - -
Pvu10g1653 580 SMART LRR_CC_2 148 173 IPR006553 -
Pvu10g1653 580 SMART LRR_CC_2 424 448 IPR006553 -
Pvu10g1653 580 SMART LRR_CC_2 205 230 IPR006553 -
Pvu10g1653 580 SMART LRR_CC_2 179 204 IPR006553 -
Pvu10g1653 580 SMART LRR_CC_2 472 496 IPR006553 -
Pvu10g1653 580 SMART LRR_CC_2 96 121 IPR006553 -
Pvu10g1653 580 SMART LRR_CC_2 344 369 IPR006553 -
Pvu10g1653 580 SMART LRR_CC_2 497 522 IPR006553 -
Pvu10g1653 580 Gene3D Ribonuclease Inhibitor 8 401 IPR032675 -
Pvu10g1653 580 Gene3D Ribonuclease Inhibitor 402 556 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1653 Pvu-Chr10 42780684 42783042 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1653 K10268 - gmx:100819538 932.554