Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1652 ATGCATGTGAAAGATTTTCCTGAAGAATGTTGGGAATCAGTGTTCAGATTCCTTGGCCTTGGTCATCATTTGGAGTCTCTATCTATGGTTTGCAAGCAGTTTCTTTCCATCACAAATAGGCTTCTATTCTCTCTCACAGTGTATGATCCAACCACTCCTCTTCTTCCTCGGTTGCTCCTCAGGTTTCCAAGGCTCAAAAGCTTAGACCTCAGTCTCTTGAATTGCCACCATGAAGGCTTGCTTCATCAAATTTCACAATCCGGGTTGGACCTTCATTTGATTAATCTATCCAACCAGAGAACACTTTCTGTTGATGGCTTAAGAGAACTTGGCTCAAACATGAAAAATTTGAAGGTTCTGATCTGCTCAAACATTGGCTCTCTTCGTGATAGCCATCTTGTAATCATAGCTTATTGTTTCCCATTTCTTGAAGAGCTTGACATAAGCTTCCCATTGAATTCTCAAGTATCTGATTTCGGGGTTCTAAGGCTCTCTTCTATGCTTGAGAATCTTCTCAAGATTAATATCTCTGGTAATCACTTGATCACTGATAAATCCTTGTTCTATCTTTGCCAAAACTGTTTGTCATTGGAAGAGATTTCATTCTTCATTTGTTTTAAGATCACTCAAACAGGCATTGCCTCTGCGATCAGCCTCAGACCCGGTTTGAAATCCATTTCCTTTAACATTGAAAAGAAGAGAATACATGGACCTGGTTTAACACTCACCCCAATTGATTTGAATTTGATTGATTCATTCAAGAGTTTTAAAAGGTTAACTGCTCTTGATTTGTCAAACTCTGTTATCTCGGATGAGTTTCTCTTTGCTGTTGCAGAAGGTGGAGGTCTTCTGCTAGAGAAGCTCACCCTCCAAGACTGTTGCAATTGTACATTCTCAGGAATCTCTTATGTGTTATCCAAATGCCAATCTGTTCAATGCTTGGATCTTCGGAAAGTTGATTTCTTAACTGATCAATGTATCAGCAAGTTATCTGTATTTCTTCTTAGCCTAACTACTATAAACCTCAGTGGTTGCTGCCAGCTGACCAATTCAACATTTTTCATCCTCACAAGAAACTGTCCTTTGCTTTGTGAGATCAAAATGGAGAGAACATATCTTGGGGTGGAAGGGGAAGAAGATTCAATGAGGGATTTTGTTGTGAACCCTGAAGTGAAAAAAGTGTATTTGGGTGATAATGTTTTGCTGAGTGATGCAAGTTTGATCAAATTTGTTTCCATTTGTCCTAGTTTGCAGCTTCTTGACATAATCGGTTGTGAGGGCGTTTCTGGTGAAGGAATTGTTGAGGTTTTGAAGAGATGCAGTGAGATAAGGCATTTGAACCTGGCCAATACAGGAATGAAAGTGTTTGAGATAGACTTTGAAGTTTCAAAACTGGAAGTGTTGAACTTGTCAGGCTCAAAAATTGAGGATGAAGCTCTATCAATGATCTCAAGGAGGTGTAGTGGACTACTACTTCTGAACATTCAGAGTTGCTGGCATGTTACAGCTAAGGGTGTGGTGGAAGTAGTAGAAAACTGCAGGAGATTGAAAGAGTTGAATCTAAAGAATTGTAGGTTGGTGAGTGATGATTTTGTTGCTTGGCTGGAGTTTTCAAAACCATCATTGAGAACAGTAGCCACACCTTCTGATGTTGATGTTTATTGCTGA 1668 0.3951 MHVKDFPEECWESVFRFLGLGHHLESLSMVCKQFLSITNRLLFSLTVYDPTTPLLPRLLLRFPRLKSLDLSLLNCHHEGLLHQISQSGLDLHLINLSNQRTLSVDGLRELGSNMKNLKVLICSNIGSLRDSHLVIIAYCFPFLEELDISFPLNSQVSDFGVLRLSSMLENLLKINISGNHLITDKSLFYLCQNCLSLEEISFFICFKITQTGIASAISLRPGLKSISFNIEKKRIHGPGLTLTPIDLNLIDSFKSFKRLTALDLSNSVISDEFLFAVAEGGGLLLEKLTLQDCCNCTFSGISYVLSKCQSVQCLDLRKVDFLTDQCISKLSVFLLSLTTINLSGCCQLTNSTFFILTRNCPLLCEIKMERTYLGVEGEEDSMRDFVVNPEVKKVYLGDNVLLSDASLIKFVSICPSLQLLDIIGCEGVSGEGIVEVLKRCSEIRHLNLANTGMKVFEIDFEVSKLEVLNLSGSKIEDEALSMISRRCSGLLLLNIQSCWHVTAKGVVEVVENCRRLKELNLKNCRLVSDDFVAWLEFSKPSLRTVATPSDVDVYC* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1652 555 PANTHER NODULIN-LIKE PROTEIN 5 228 - -
Pvu10g1652 555 PANTHER NODULIN-LIKE PROTEIN 243 539 - -
Pvu10g1652 555 Gene3D Ribonuclease Inhibitor 1 236 IPR032675 -
Pvu10g1652 555 Gene3D Ribonuclease Inhibitor 238 375 IPR032675 -
Pvu10g1652 555 Pfam Leucine Rich repeat 464 484 IPR001611 GO:0005515
Pvu10g1652 555 Gene3D Ribonuclease Inhibitor 455 547 IPR032675 -
Pvu10g1652 555 Gene3D Ribonuclease Inhibitor 380 454 IPR032675 -
Pvu10g1652 555 SMART LRR_CC_2 414 439 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 388 413 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 487 512 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 194 219 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 334 359 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 462 486 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 140 167 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 513 540 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 88 113 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 168 193 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 256 280 IPR006553 -
Pvu10g1652 555 SMART LRR_CC_2 21 48 IPR006553 -
Pvu10g1652 555 SUPERFAMILY RNI-like 51 350 - -
Pvu10g1652 555 PANTHER UNCHARACTERIZED 243 539 - -
Pvu10g1652 555 PANTHER UNCHARACTERIZED 5 228 - -
Pvu10g1652 555 SUPERFAMILY RNI-like 288 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1652 Pvu-Chr10 42776204 42777871 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1652 K10268 - gmx:100811565 908.672