Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1650 ATGGCTCTTCTTCTCCGTCTCAAACGTCGAAGTACAAGCAGTTCTCGCTTCCTCTTCTTCTCCACTTCCAATTCCGATTCTAACTCCAATTCCAGCTCTTCCTTCTCTTCCATTTTCGGAGACATCAAGGCCAATCTCAAACAAGCCTCTTCCCCTTCCTCAAACCCTCGCCCCCAACAACATTTTGCAGACGAGATCCGAAGAAATCTCAACGAGTTCCGCGCCCGGACCGCTCCTCCTCCGCCCGGGGACCCGTCGCAGCAGCAGCAGGAGCAGCAATTCTCGTTTCAGGACGGGTACCAACGCAGCATGCAGCGCAATCCCTCCAGATCGGAACAATTGCCCTCCCTCGACATGGAAGCTATTCGCCACAGCCTGCGGAACATGTCTGGTGGCCAAGCCCCGGTGCGGCAGAGTCGTCCTGGGGTGATCGGCGGCACGAGTGCCCTTCCGGAGTTGATTTTCGGGAAGGAGATGAGGAAAGAGGGCTCGGAGTCAACGGCGATGCGTTCGGCGGCGTTCTTGAAGGTCTACGGCGTGGAGGATTTGGGGAAGAAATTGAGGATGCTGAGGCCGGAGGGAAAGGAAAAGGATTGGTTTTCAGTGAGGGAGCTGAGTGAGAGGTTGGTAAGGTTGAGGAAGATGGAGGAGGAGCAGGCCAAGTCCAATACCCAAGGTGAAGCTTACGACAAAATAAAAGGATGTCTCATTGAGATGCAGGAAGAGGGAACTCGCGCCAAGAAGAAAGCTTCACTTCAGGGACTTAGTATTTTGAGTCACTTGAGTGGGACTCAGACCTACTCTCTGGAACCTCCTAAACCCCATCTTGTTGAAAAGTACTTTCATCCGGATAATATGTCATCTGCTGAGAAGATGAAAATTGAGCTTGCCAAGGTTAGGGACGAGTTTAAAATGTCGGAGTCGGACTGCGGTTCTGCGCGTGTTCAAATTGCACAACTCACAACTAAGATTAAGCATCTATCAGGAGTCCTACACAAGAAGGATGTTCATTCTCGTAAAGGTTTGGTGGCAATGGTTCAGAGGAGAAAAAGATTACTGAAATACCTCAGAAGAACTGATTGGGATTCCTATTGTTTTGTTATCTCCAAGCTGGGTCTACGTGATAATCCTGATTATACCTATAGATCTCGAACTGGTATAGCAGCATAG 1170 0.5017 MALLLRLKRRSTSSSRFLFFSTSNSDSNSNSSSSFSSIFGDIKANLKQASSPSSNPRPQQHFADEIRRNLNEFRARTAPPPPGDPSQQQQEQQFSFQDGYQRSMQRNPSRSEQLPSLDMEAIRHSLRNMSGGQAPVRQSRPGVIGGTSALPELIFGKEMRKEGSESTAMRSAAFLKVYGVEDLGKKLRMLRPEGKEKDWFSVRELSERLVRLRKMEEEQAKSNTQGEAYDKIKGCLIEMQEEGTRAKKKASLQGLSILSHLSGTQTYSLEPPKPHLVEKYFHPDNMSSAEKMKIELAKVRDEFKMSESDCGSARVQIAQLTTKIKHLSGVLHKKDVHSRKGLVAMVQRRKRLLKYLRRTDWDSYCFVISKLGLRDNPDYTYRSRTGIAA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1650 389 SUPERFAMILY S15/NS1 RNA-binding domain 295 375 IPR009068 -
Pvu10g1650 389 Gene3D - 341 376 - -
Pvu10g1650 389 Coils Coil 289 309 - -
Pvu10g1650 389 Gene3D - 290 339 - -
Pvu10g1650 389 PANTHER S15/NS1, RNA-BINDING PROTEIN 2 384 - -
Pvu10g1650 389 Pfam Ribosomal protein S15 298 374 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pvu10g1650 389 SMART Ribosomal_S15_2 296 374 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pvu10g1650 389 Hamap 30S ribosomal protein S15 [rpsO]. 286 375 IPR005290 GO:0003735|GO:0005840|GO:0006412
Pvu10g1650 389 MobiDBLite consensus disorder prediction 74 115 - -
Pvu10g1650 389 MobiDBLite consensus disorder prediction 87 114 - -
Pvu10g1650 389 CDD Ribosomal_S15p_S13e 298 372 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pvu10g1650 389 TIGRFAM S15_bact: ribosomal protein uS15 295 374 IPR005290 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1650 - - ccaj:109818150 424.476