Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1639 ATGTTTACGTCATGCAAGTTGACTCTTCGGGCGATGACTTACTTAGGCGACGTCTTACTTCTGCGCGATGCTTCTCTTGGGCGATGTGCGATGATCCATCTTGGTGGTGACACATCTCGGCGATTATTTATACTGCAGAACGCCGCTTCTACATACGGCGATTATGTTGACTTTGGACCACCTACCTTTCTCTTGTCCACGTCATCACACCCGATGACCTGGTCGGTACAAATCCTTAACAGAGGACTTGTTTTGCAGCCTCAAATTCACAATCTTGGGCAACAACATTCTATTCCCTTGCCTGGTCAGATGCAGACACATCAACAGCTTCTATCTCAAAATGTTCAAAATAATGTTGCATCTCAACCTAACCTTCCACCTGTATCTAGTCTAGCCCAGACTACCAGCCAAAATATTGTCCAGAACTCTAACATACAGAACTTACCTGGGCCAAATTCAGTTGGAAGCACCATTAGCCAAAATTCAAACTTACAGAGTATGTTTCCTGGTTCTCAGAGATCAATGCCAGGAAGGCAGCAGGTTGTTCCCCCACAACAACAGCTGCAATCACAGAATCCACAGCAATTTCTTTACCACCAGCAGTTTTTGAAGCAGAAGCTCCAGCTACAATCTCAGATGCAGCAGCAACAACAGCAAAGCCTTATGCAACCAAATCAATTGCAATCTTCTCAGCAGTCTACTAATATTCAGCAGTCAATGCAGTCCATGCCTCAGCAACATTCACAAGTTATGAGGCATCAACAACAACAGACTTCTATTGTACATCAGCAACAAACACCAGGCACTCAACAGACAATCTTACCTACACAACAGCAACAACTTATGGGACCTCAGTCAAATACCACAAACATGCAGCATGCACAGATGCTTGGGCAACAGAACAATGTTGGTGATGTACAGCAGCCTCAGAGGATGCTTTCACAACAAAGTAATCTTACAAGCATGCAACAGAGGCAACAACAGTTAATAAATCAGCAAAACAACCCAGCAAATGTACATCAACAACAATTGGGAAATAATGGCCCTGGGTTACAGCAGCAACATTTGCTTGGACCCGACTCTGGCAATGCAGACATGCACACAAGTCATCACTCTGCACACATGCTGCAACATCCAAAGGTTCCAATGCAGCAACAATCACAACAAAATACATCAAATCTGTTGCTACCTCATTCACAGCAGTCACAGCCACTGGGTTCACAACAGCAATTAATGCCTCAGATTCACACTCAGTCTACACAGTTGCAACAACAATTGGGTTTGCAGCAGCAGCAGCAGCCAAATCCCTCACTCCGAGATATGCAGCAAAGAATCCAAGCATCAGGGTCCTTACTTCAACAACAAAATGTTCTTGATCAACAAAAACAGTTGTATCAATCTCAAAGAAATCTTCCAGAAACATCAGCAACTTCTCTGGATTCTACAACACAGTCTGCACAACCAAGTGGGAATGATTGGCAAGAAGAAGTTTACCAGAAG 1500 0.4393 MFTSCKLTLRAMTYLGDVLLLRDASLGRCAMIHLGGDTSRRLFILQNAASTYGDYVDFGPPTFLLSTSSHPMTWSVQILNRGLVLQPQIHNLGQQHSIPLPGQMQTHQQLLSQNVQNNVASQPNLPPVSSLAQTTSQNIVQNSNIQNLPGPNSVGSTISQNSNLQSMFPGSQRSMPGRQQVVPPQQQLQSQNPQQFLYHQQFLKQKLQLQSQMQQQQQQSLMQPNQLQSSQQSTNIQQSMQSMPQQHSQVMRHQQQQTSIVHQQQTPGTQQTILPTQQQQLMGPQSNTTNMQHAQMLGQQNNVGDVQQPQRMLSQQSNLTSMQQRQQQLINQQNNPANVHQQQLGNNGPGLQQQHLLGPDSGNADMHTSHHSAHMLQHPKVPMQQQSQQNTSNLLLPHSQQSQPLGSQQQLMPQIHTQSTQLQQQLGLQQQQQPNPSLRDMQQRIQASGSLLQQQNVLDQQKQLYQSQRNLPETSATSLDSTTQSAQPSGNDWQEEVYQK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1639 500 MobiDBLite consensus disorder prediction 379 440 - -
Pvu10g1639 500 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 77 233 - -
Pvu10g1639 500 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 231 500 - -
Pvu10g1639 500 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 77 233 IPR044661 GO:0003713|GO:0031490
Pvu10g1639 500 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 231 500 IPR044661 GO:0003713|GO:0031490
Pvu10g1639 500 MobiDBLite consensus disorder prediction 303 370 - -
Pvu10g1639 500 Coils Coil 199 219 - -
Pvu10g1639 500 MobiDBLite consensus disorder prediction 303 440 - -
Pvu10g1639 500 MobiDBLite consensus disorder prediction 216 270 - -
Pvu10g1639 500 MobiDBLite consensus disorder prediction 463 500 - -
Pvu10g1639 500 MobiDBLite consensus disorder prediction 143 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1639 Pvu-Chr10 42655077 42657800 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1639 K14972 - pvu:PHAVU_010G1579000 755.747