LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu10g1638	CTCCAAGCCATGAAAGAAAGTTATTTGCCGGATATGAATGAAATGTACCAAAAAATTGCTAATAAACTTCAGCAGCATGATTCTCTTCTCCAACCATCGAAATCAGATCAGATTGATAAGCTGAGGGCATATAAAATGATGTTGGAGCGTATGATGGCACTCGTACAGATTCCCAAGAGCAACATTTTGCCTCATTTCAAGGAAAAACTGGGATCATATGAGAAGCAGATTATAAATCTCATAACAAATAGACCCAGGAAAGGCATGTCTTCTGTGCAGGTAGGACAGATTCCCCAGAATCATATGTCCTCCATGCAACAGCCCCAATCCCAAGTTACGCAATTACAGTCTCATGAAAATCAAATGAACTCTCAACTGCAGTCAACAAATTTACAAGGTTCTGTGTCAACCATGCAGCAGAATAATGTTGCAAGCTCTCAGCACAATCCTTTGTCTGGTGTATCAGCAGGACAACAGAGTATGATGAATTCTATGCAACCTGGAACTAATTTAGATTCTGGACAAGGAAATTCTATGAACTCCCTTCAACATGTACCAATGAACTCCATCCAGCAAACTACTGTTAGTACTCCTCAACAACAGACTAACATTAATTCTTTGCAATCACAAGGTGGGGCAAATGTCAGTCAACCAAATTCCCTTCAGTCAGGTTCCAGTGCACTTCAACACCAACTGAAACATCAGCAGGAACAGCAGATGCTGCAGAATCAGCAATTCAAACAATATCAGCACCGACAAATGATGCAGAGGCAGCTCCTTCAGCAGCAGCAACTACACCATCCAGCAAAGCCACAGCTATCTGCACAATTGCAAACACATCAAATGTCCCAGCTTCACCAAATGAATGATATAAATGACATAAAAATGCGACAAGGAATGGGGGTTAAGCCAGGGGTCTTTCAACAACATCTTACATCAGGTCAACACTCAGCATATTCCCATCAACAGCTGAAACAAGGGAATGCATTTCCTGTTTCTTCACCCCAACACCTTCCGGCTGCATCTCCTCAAATTCAGCAACATTCATCTCCCAAAGTTGAACAACAAAATCATCTCCCGTCTAAAACTAAAGTTGCAACTCCTCTGCAATCTTCTAATTCTCCCTTTGTGGGACCTACCCCTTCACCTCCTTTGGCTCCATCTCCTATGCCAGGAGAATCTGAGAAGCCCGTTCCCTGTGTTTCTTCAATATCAAATGGTGCAAATATTGGACATCAACAAACAGGGGGTGCAGTAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATTTCAGCGTCTCCTTTATTGGCAGAATTCAGTGGTCCAGATGGTGGGCATGGTAATGCTTTAGCTGCCACTTCTGGGAAGTCAACTGTTACAGAGCAGCCTCTTGAACGCCTAATTAATGTG	1416	0.4315	LQAMKESYLPDMNEMYQKIANKLQQHDSLLQPSKSDQIDKLRAYKMMLERMMALVQIPKSNILPHFKEKLGSYEKQIINLITNRPRKGMSSVQVGQIPQNHMSSMQQPQSQVTQLQSHENQMNSQLQSTNLQGSVSTMQQNNVASSQHNPLSGVSAGQQSMMNSMQPGTNLDSGQGNSMNSLQHVPMNSIQQTTVSTPQQQTNINSLQSQGGANVSQPNSLQSGSSALQHQLKHQQEQQMLQNQQFKQYQHRQMMQRQLLQQQQLHHPAKPQLSAQLQTHQMSQLHQMNDINDIKMRQGMGVKPGVFQQHLTSGQHSAYSHQQLKQGNAFPVSSPQHLPAASPQIQQHSSPKVEQQNHLPSKTKVATPLQSSNSPFVGPTPSPPLAPSPMPGESEKPVPCVSSISNGANIGHQQTGGAVAPAQSLAIGTPGISASPLLAEFSGPDGGHGNALAATSGKSTVTEQPLERLINV	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu10g1638	472	MobiDBLite	consensus disorder prediction	329	398	-	-
	Pvu10g1638	472	MobiDBLite	consensus disorder prediction	329	376	-	-
	Pvu10g1638	472	MobiDBLite	consensus disorder prediction	453	472	-	-
	Pvu10g1638	472	MobiDBLite	consensus disorder prediction	448	472	-	-
	Pvu10g1638	472	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	1	190	IPR044661	GO:0003713\|GO:0031490
	Pvu10g1638	472	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	293	471	IPR044661	GO:0003713\|GO:0031490
	Pvu10g1638	472	MobiDBLite	consensus disorder prediction	377	394	-	-
	Pvu10g1638	472	MobiDBLite	consensus disorder prediction	101	245	-	-
	Pvu10g1638	472	PANTHER	OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED	1	190	-	-
	Pvu10g1638	472	PANTHER	OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED	293	471	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu10g1638	Pvu-Chr10	42651127	42652742	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu10g1638	K14972		-	pvu:PHAVU_010G1579002	842.032