Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1630 ATGGTTCCACACACAAAGAGAGAGAGAAGCTATCAACTTATTAGCAACAAGGAGAGGCTACAATTGCTCTCAAATCCTCAAAAGTGTCCCAAGGAGAGAAAAAAAATGCCCCCAAGATCAGGAAAAGGGAAATCAAATAAGGCAAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGCAGCAGCACCTTCTCTTGTTGACATCACTGTGGTCACTCCTTATGATACAAGGATTCTCTTGAAGGGTATCTCTACTGATAAGATACTTGATGTGAGGAAACTATTGGCTGTGAAGGTGGAGACATGCCATTTCACAAACTATTCTTTATCACATGAGGCCAAAGGTCATAACTTAAATGAGAGAGTGGAAATTGCTACCCTTAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTACACAGAGGAGGCCCAAGCAATTGCGCACGTGCGAAGGGTGTTGGACATTGTGGCCTGCACAACAAGGTTCGGTAGGCCCAAACGTAGTCTAACAAGCCCAGATTCAAGGCCCAAGAAAAACGGGAAGGCCCAACATCAGAACAAGACGAGTTTGAGCCCACCCGAGACACCGAATGGGGAATCCCGGGTCGGGTCGCCGTCGTCGGAGGCGCCACTGTCGGCGATCTCCGATAACGTGGGGATGAAGGCCATTCACCCGACGCCGAAGCTCTCAGATTTCTACGAGTTCTTCTCCTTGTCTCACCTCTCTCCCCCCATTTTACAATTGAAGAGGTGTGAAGTGAAGGATGAAGATGATAGGCGCAAGGGAGATTACTTTCAGCTTCAGGTTAAAATATGCAATGGGAAGGTAATAGAAGTGGTTGGTTCAGAGAAAGGGTTTTACACTGTAGGGAAGCAGTCTCTGCACAGCCACACTTTGGTTGATCTTCTTCAACAGCTCAGCCGAGCCTTTGCTAATGCATATGAATCGTTGATGAAAGCCTTTTCGGAACGTAATAAGTTTGGAAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCATCTGTAGCCGAGTCTCCTTCAAGCTTTCCTGCATTGCCAGCAGAGGATGAACACTGGGGTGGTAATGGTGGCGGCGGAGGAAGAAATGGCGAATTCAATCTTAGACCATGGGCAACGGATTTTGCAATATTGGCCTCTCTTCCTTGCAAAACTGAGGAGGAGAGAGTGGTCAGGGATAGAAAAGCATTTCTGCTTCACAATCAATTTGTTGATACCTCAATATTTAAGGCTGTGGTGGCTATACAACATGTTGTGGAATCCAAGTCAAACATGAAGAATGAATTGAATTCTTCTCCGGGTTCTGTTCTGCTTGAAGATCAGGTGGGAGACTTATCCATTACAGTCAAACGTGACATCCAGAATGGAAATAAAAAGCATGATTCTATACCAGATGAATCCATTGTGCATAAGGAGGATGTTCAGAAGAATTTAATCAAAGGATTGACTGCTGATGAAAGTGTGATTGTTCATGATACTTCTTCCTTGGCTGTGGTTGTTGTACACCACTGTGGATATACTGCAACAGTGAAGGTTGCGGGTAATGTGAACATGAGGAAGCTTAAAGTTCGAGACATTGAGATAAATGATCAGCCAGATGGTGGGGCAAATGCTCTCAACATCAACAGTTTGAGGCTATTGCTTCACAAGTCTGGATCTGATTCATTAGAAGGGAATATATCATCCCTATCAAATTCGGATGACTTAGATGCTACTAAAAGCCTTGTTCGGAAGGTTGTTCAAGAAGGCATAGAAAAAATAAAGGAGGAGCCAAGTGTTTCAAAAAGGTCTATTCGATGGGAACTTGGTTCCTGTTGGATTCAGCATTTGCAGAAACAGGAAACTTCATCTGATAACAGTTCCAAAAACAAAGAAGATGTCAATGAAGCTGAGCAAGCTGTTAAAGGTCTTGGAAAGCAATTTAAATTTTTGAAGAAGAGAGAGAAGAAATCAAATAATGTAGATGGTTCAGATTCTCGAGAGCAAAATGACTCTAGACATGGAATTGTGAATGATGATGATGAGAAAGTTGAGCCGAACAGTGGTGACTTAAGTAACTCTAATGATTTAGAGAAACTACTTTCTGAAGAAGCATTTTTGCGTCTCAAAGAATCTGGAACTGGCCTTCACATGAAGTCAGTGGATGAGCTTATCAGCATGGCAGACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGCTATGGACTTTGGATCACTTGAACTTTCTCCAGTGGATGGGCGAACATTGACCGACTTTATGCATTTAAGAGGATTAAAGATGAGATCTTTGGGTCAAGTGGTTAAACTTGCTGAGAATCTTCCTCACATACAATCCCTTTGTATTCATGAGATGATTACTCGAGCTTTCAAGCATCAACTTAAAGCAGTTATTGCCTCTGTTGACAATGCAGCTGATCTATCAGCAGCCATTGCATCAACACTAAATTTCTTACTTGGTGGGTGTCGAACAGAAGATACTGATCAAAGTTTGAATGATGATCATAATCTCAGAATTCAATGGCTACGAATGTTTTTGTCCCAAAGATTTGGGTGGACACTGAATGATGAATTCCAACATTTGAGGAAGTTGTCGATTCTCAGAGGGCTATGTCACAAGGTTGGATTGGAAATATTCCCTAGAGATTATGACATGGAGTCTAGTAAGCCCTTTGAGAAAAATGATATTATCAGCTTGGTTCCTGTTTGCAAGTATGTAGGGTGCTCCTCAATTGATGGACGCAATTTATTGGAGGCTTCAAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTACGGAACAAAGGCATTGGCTAAAATGATGGTTGTTTGTGGACCCTATCATCGAAATACAGCAAGTGCATATAGTCTCCTAGCTGTGGTTCTCTACCATACTGGAGATTTTAACCAGGCCACCATTTATCAGCAAAAGGCCTTGGATATAAATGAGAGGGAGCTTGGTCTTGACCACCCTGACACTATGAAAAGCTACGGGGATCTTTCTGTTTTCTATTATCGTTTGCAACACATTGAGCTGGCTCTGAAGTATGTTAATCGTGCTCTATTCCTTCTTCACTTTACATGTGGGCTGTCTCATCCAAACACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTTCATGTGGCACTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGGTTGTTAGGAGCAGATCATATACAGACTGCCGCAAGCTATCACGCCATAGCTATATCTCTTTCATTGATGGATGCATTTTCTCTGAGTGTGCAACATGAGCAAACTACACTAAAGATACTTCAAGCAAAGCTTGGATCAGAAGACCTTCGTACACAGGATGCTGCGGCATGGCTTGAATATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCACCTTAGCGTGTCAGATCTCCTGGATTTTATCAGTCCTGACCCTAAAAGAAATGATGCACAGAGAAAACAGAGGCGTGCAAAGTTGCTCCCAACAAGTGATAACAGTCAAGAACATGAAGATGCAGTAGTTGAGGAGAGCATTGTTTTTTATGACTCAAGAGATGCTCCAACCATGGTAGAAGGGAATATAGAAGAAACCATTGACACACGAGGTGATTCTCAAGTACCAAAAGAAAATGGTGATTCAACTAGTTACGGGGCAGTGACAAGTGAAGTTGTTTATGAGGCATCATCCGATGAGGGTTGGCAAGAAGCCAATTCAAAAGGGCGATCAGGAAATGCTGCTAACCGGAAGTTTGGACACAAAAAGCGACCTCTTCTGTCAAAGCTCAGCATTAATGGTTCTAATAATCACATTTACAGGGAAAGCAGTTCAAGGAATGAGATTACTTCACCACCACAAAGAGGAGTTCCTATTTCATCTCCTTCTAGACAACCAAAAGCTAGAAGCATAGCCTTGAACGAGGATTCTGTTAATTATTCAACAAAAGCTTCTGTGTCAAAAGTTTCATCTCCAGCATCTCTAAGTTCATTGGCTTCAAAGTCTATATCTTACAAAGAAGTAGCTCTGGCGCCACCAGGTACAGTTTTAAAGCCACTGTTGGAAAAGGCTGAGATGGACAAGGTTAATGCTGAAGACGAGATATGCAGCAGTCCATCTGTGATATCTATCAACGAAGGTACGTGCCAAAGTTCCATAGTTAATGCAGTTTCTCAGAATGGTGAAACAGAGGAAACTCAAGAAATTGAACCTCAACAAGAAAATTCTACATTGGAAGTTGAGAAGGTTTCCCTTGCTTCTTCTGATCAGGAAAAACCAACAGAAACAAATGGCAGTAAGCTTTCAGCTGCAGCAAAACCTTTCAATCCAGGAATGTTGTCGATGTCTCACCATTTAAATTCAGGTTCCTTCACTAGTATGTATGACACAGATGTTAGTCAAGGCATGCATGTGGAGCCTGTGCTCCCCCCTGCTGTTGCTAGGGTCCCCTGTGGACCTAGATCACCTCTATATTATAGAACCAACTACACTTTCCGCATGAAACATGGTTTTAGCAAAAGCCAAACACCTATCAGAGAAAAAAGCGGATTTGGATCTCCAAGAATAATGAATCCACATGCACCTGAGTTTGTTCCTAGAAGTGCTTCTCAGATCGAAGCCAATGATTCCAATTCAAATGCTTCCGATGAGCATAACTCTTTATCTGAGGTAGGCATGGCAGAAAAAAATAAAAATTTGGCTGAAATCAAGGCAAGTTCCACAAAAAACAGTATTTCTGAAGCTGAGAAGTCCGAGATAGCAAGGCAGATATTGCTCAGTTTTTTAGTAAAATCTGTCAAAGAAAATATTGATTCTGTGGATGAATCCAACGACAGTGAAGGAAAAGTTAGGAAGCTGGGAAATTGTGATGATGAAATAGCTAAGGACAGTGCTGTCATAAACATTATGTATGGAAATGAAGAAAAGAACAAGACAGTGCCTCATTCCAGTGATAGTGATGAGCAAGAGACATTAGGTGTTAGTGAAAAAAAGAATGGTGATGAAGGGTTCATAGTTGTCTCAAAGAGGAGGAAAAACAGGCAGAAGATCACAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCTTCAGTTCGTTAA 5208 0.418 MVPHTKRERSYQLISNKERLQLLSNPQKCPKERKKMPPRSGKGKSNKAKAEKKKKEEKAAAPSLVDITVVTPYDTRILLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEAKGHNLNERVEIATLKPCLLRMVEEDYTEEAQAIAHVRRVLDIVACTTRFGRPKRSLTSPDSRPKKNGKAQHQNKTSLSPPETPNGESRVGSPSSEAPLSAISDNVGMKAIHPTPKLSDFYEFFSLSHLSPPILQLKRCEVKDEDDRRKGDYFQLQVKICNGKVIEVVGSEKGFYTVGKQSLHSHTLVDLLQQLSRAFANAYESLMKAFSERNKFGNLPYGFRANTWLVPPSVAESPSSFPALPAEDEHWGGNGGGGGRNGEFNLRPWATDFAILASLPCKTEEERVVRDRKAFLLHNQFVDTSIFKAVVAIQHVVESKSNMKNELNSSPGSVLLEDQVGDLSITVKRDIQNGNKKHDSIPDESIVHKEDVQKNLIKGLTADESVIVHDTSSLAVVVVHHCGYTATVKVAGNVNMRKLKVRDIEINDQPDGGANALNINSLRLLLHKSGSDSLEGNISSLSNSDDLDATKSLVRKVVQEGIEKIKEEPSVSKRSIRWELGSCWIQHLQKQETSSDNSSKNKEDVNEAEQAVKGLGKQFKFLKKREKKSNNVDGSDSREQNDSRHGIVNDDDEKVEPNSGDLSNSNDLEKLLSEEAFLRLKESGTGLHMKSVDELISMADKFYDEVALPKLAMDFGSLELSPVDGRTLTDFMHLRGLKMRSLGQVVKLAENLPHIQSLCIHEMITRAFKHQLKAVIASVDNAADLSAAIASTLNFLLGGCRTEDTDQSLNDDHNLRIQWLRMFLSQRFGWTLNDEFQHLRKLSILRGLCHKVGLEIFPRDYDMESSKPFEKNDIISLVPVCKYVGCSSIDGRNLLEASKIALDKGKLEDAVNYGTKALAKMMVVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAISLSLMDAFSLSVQHEQTTLKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFISPDPKRNDAQRKQRRAKLLPTSDNSQEHEDAVVEESIVFYDSRDAPTMVEGNIEETIDTRGDSQVPKENGDSTSYGAVTSEVVYEASSDEGWQEANSKGRSGNAANRKFGHKKRPLLSKLSINGSNNHIYRESSSRNEITSPPQRGVPISSPSRQPKARSIALNEDSVNYSTKASVSKVSSPASLSSLASKSISYKEVALAPPGTVLKPLLEKAEMDKVNAEDEICSSPSVISINEGTCQSSIVNAVSQNGETEETQEIEPQQENSTLEVEKVSLASSDQEKPTETNGSKLSAAAKPFNPGMLSMSHHLNSGSFTSMYDTDVSQGMHVEPVLPPAVARVPCGPRSPLYYRTNYTFRMKHGFSKSQTPIREKSGFGSPRIMNPHAPEFVPRSASQIEANDSNSNASDEHNSLSEVGMAEKNKNLAEIKASSTKNSISEAEKSEIARQILLSFLVKSVKENIDSVDESNDSEGKVRKLGNCDDEIAKDSAVINIMYGNEEKNKTVPHSSDSDEQETLGVSEKKNGDEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR* 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 655 688 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1675 1697 - -
Pvu10g1630 1735 ProSiteProfiles Clueless (Clu) domain profile. 357 629 IPR025697 -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1425 1471 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 619 639 - -
Pvu10g1630 1735 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 36 1732 - -
Pvu10g1630 1735 Pfam Translation initiation factor eIF3 subunit 135 750 892 IPR033646 -
Pvu10g1630 1735 SUPERFAMILY TPR-like 926 1081 IPR011990 GO:0005515
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 655 696 - -
Pvu10g1630 1735 ProSiteProfiles TPR repeat profile. 963 996 IPR019734 GO:0005515
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1425 1470 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 163 210 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1263 1336 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1178 1206 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1678 1697 - -
Pvu10g1630 1735 CDD CLU-central 752 893 IPR033646 -
Pvu10g1630 1735 Pfam Mitochondrial function, CLU-N-term 84 155 IPR028275 -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 22 57 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 182 210 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1174 1206 - -
Pvu10g1630 1735 MobiDBLite consensus disorder prediction 1296 1336 - -
Pvu10g1630 1735 Gene3D Tetratricopeptide repeat domain 922 1165 IPR011990 GO:0005515
Pvu10g1630 1735 SMART tpr_5 1005 1038 IPR019734 GO:0005515
Pvu10g1630 1735 SMART tpr_5 1047 1080 IPR019734 GO:0005515
Pvu10g1630 1735 SMART tpr_5 963 996 IPR019734 GO:0005515
Pvu10g1630 1735 Coils Coil 635 655 - -
Pvu10g1630 1735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 36 1732 IPR027523 GO:0006996
Pvu10g1630 1735 Pfam Tetratricopeptide repeat 962 1032 - -
Pvu10g1630 1735 Pfam Tetratricopeptide repeat 1046 1120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1630 Pvu-Chr10 42558419 42569740 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1630 K03255 - gmx:100801625 2810.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1630 10 42558419 42569740 Pvu10g1630 10 42558419 42569740 ECH