Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1620 ATGGTTTTGTTTGGTCACTTGCACTTGCACGTCACAATCAACCTCACCACGTTAAAACCCAAACCAATTATCCCCACAACACCACCTTCCACAAAAATCATTCAATTCCCTTGCTTCCATTCCATGGCTCTCATCACCACCCAACCTAAAAACCCCATTTTCCACCGCTGCACCACCCTTCACCGCTCAATTCCACGGCGGGATAATAGTACTACTGTTCTTGGTCTTGGGTCCATTAAAAACTTCAGCTTTGACCAAAAACAAAGCAAAATCTCCCTTAAAAACAACCCCTTTTGCTATAATTTGGCAGTGACGGCCAAAGCCACGGCCAATGCAGCATTTGGAGGGGGTTTGGAGGCAGAGGGGTCACTGAAACACAGAAGGATTTTGTTGTCTGAAGTTGAGGTGAAGAGAGAGAGGAGTGTTTTCTTTGGGAGGAAATGGAACTCTTTAGATGTTGGCACTGCTGGAATGGTGTTGGTCATGCATGTGCTTTGCCTCTTTGCTCCATTCCACTTCAATTGGCCAGCTTTTTGGGTGGCTGTGGCTCTCTACGTTGTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCACAGGAACCTTTCTCATAGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTTCTTTGCCTATTGTGGGGCTCTGGCACTTCAGGGAAACCCAATAGATTGGGTAAGCACACATAGATACCATCACCAGTTTTGTGATTCTGAGAGAGACCCTCATAGCCCCACTGAAGGGTTCTGGTTCAGCCATATGAGCTGGCTCTTTGATACTAATTCTATCATTGAAAGGTGTGGAGAGCCAAATAATGTTGTTGATTTAGAGAAACAACCTTTTTATAGACTTCTCCGAAGCACTTACCTTGTCCACCCTTTTGCTTTGGGAACCCTTCTATATGCAGCAGGAGGATTTCCTTTCCTAGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTATGGGGGAATCAGGCCTGGAACACCAGGGACTTGTCCAGAAATAATTGGTGGGTGGCATTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCTTTTGAGTATTCAGCTCGACATGGACTAGAGTGGTGGCAACTAGACATGACTTGGTACGTTGTGAGATTTCTCCAAGCTGTTGGGTTGGCCACTGAAGTCAAGTTACCCACAGAGAGTCAGAAGCAGAGAATGGCATTCAATAGTGATACAATAACCACATGA 1278 0.4538 MVLFGHLHLHVTINLTTLKPKPIIPTTPPSTKIIQFPCFHSMALITTQPKNPIFHRCTTLHRSIPRRDNSTTVLGLGSIKNFSFDQKQSKISLKNNPFCYNLAVTAKATANAAFGGGLEAEGSLKHRRILLSEVEVKRERSVFFGRKWNSLDVGTAGMVLVMHVLCLFAPFHFNWPAFWVAVALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYFFAYCGALALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTNSIIERCGEPNNVVDLEKQPFYRLLRSTYLVHPFALGTLLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAVGLATEVKLPTESQKQRMAFNSDTITT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1620 425 CDD Delta9-FADS-like 174 406 IPR015876 GO:0016717
Pvu10g1620 425 PRINTS Fatty acid desaturase family 1 signature 198 218 IPR015876 GO:0016717
Pvu10g1620 425 PRINTS Fatty acid desaturase family 1 signature 235 264 IPR015876 GO:0016717
Pvu10g1620 425 PRINTS Fatty acid desaturase family 1 signature 320 341 IPR015876 GO:0016717
Pvu10g1620 425 PRINTS Fatty acid desaturase family 1 signature 363 377 IPR015876 GO:0016717
Pvu10g1620 425 PANTHER ACYL-COA DESATURASE 104 420 IPR015876 GO:0016717
Pvu10g1620 425 Pfam Fatty acid desaturase 175 394 IPR005804 GO:0006629
Pvu10g1620 425 PANTHER BNAC05G37460D PROTEIN 104 420 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1620 42 421 Lipid Metabolism Gene Families AT3G15850 65.969 3.11e-178 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1620 K20416 - gmx:100527024 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1620 10 42480188 42482472 Pvu10g1620 10 42480188 42482472 ECH