Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1615 ATGGAGAGCGAACCGCAAAGTGCAGGCAAAGATGAGGTTCTATCAGTTGAGCTTTCAGCTCCTTCTGCTTGGAAGAAACTGTTCTTCCCTAAGAAAGTAGGAACACCAAGGAAAAGTGAGATTGTGTTCATAGCTCCTACTGGGGAAGAGATCACTTCCAAGAAGCAGTTGGAGCAGTACCTTAAGGCACATCCTGGGAATCCTGCCATCTCGGAGTTTGACTGGGGAACCGGTGAGACCCCTAGGCGGTCAGCAAGGATTAGTGAGAAGGTGAAATCGAGCCCAACGGCAGAGACTGAGCCTCCAAGGAAAAGATCCCGAAAATCATTCGGTTCAAGGAAGGACAACAAAGAAAACGAACCCGCTGCTGAAGAATCCAAACCAGATCCGGATGAAACTGATAACAACAAGCAAGAAAAGACTGATGCAGAGGAGATCAAGAAGAGTAATGCTGAAGTGCAAAAGGCAACAGCTGAAAAGCCTGAGGGAGGAGAAGAAGCATTGTTGGCTGAGTCAGAGGAGAAAATAGCTTTGAATACTGAGGAGATCACTGAAAAACCCCAAGAGGAGGAGGAGAAGGTCACTGAAAAGCCTGAGGAGCAGGAGGAGGTCATTGAAACACCCCAAGAGGGAATTGCACCAGGGAAAGCAAATGGGACAGTGGATGACAGTAAGCAAGAGATAGAAGATGCTGTGATTCCTGATGCAAATGGAGGAGCTGAGAAAGTGAACCTGAACCCAAATGTGGAGGAGACGAACAATAGCAGAGAAATCCCAGTAAGTGATGGAAAGAACAGCATTCAAGCAGAGGAGCAAGTAAATAAAATGGTGGACAATGGACAGGTTATTTGGAGCTGTGCTCAGTGA 867 0.4706 MESEPQSAGKDEVLSVELSAPSAWKKLFFPKKVGTPRKSEIVFIAPTGEEITSKKQLEQYLKAHPGNPAISEFDWGTGETPRRSARISEKVKSSPTAETEPPRKRSRKSFGSRKDNKENEPAAEESKPDPDETDNNKQEKTDAEEIKKSNAEVQKATAEKPEGGEEALLAESEEKIALNTEEITEKPQEEEEKVTEKPEEQEEVIETPQEGIAPGKANGTVDDSKQEIEDAVIPDANGGAEKVNLNPNVEETNNSREIPVSDGKNSIQAEEQVNKMVDNGQVIWSCAQ* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1615 288 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Pvu10g1615 288 MobiDBLite consensus disorder prediction 96 204 - -
Pvu10g1615 288 Pfam Methyl-CpG binding domain 18 79 IPR001739 GO:0003677
Pvu10g1615 288 MobiDBLite consensus disorder prediction 246 265 - -
Pvu10g1615 288 MobiDBLite consensus disorder prediction 62 265 - -
Pvu10g1615 288 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 9 254 IPR039622 -
Pvu10g1615 288 Coils Coil 136 156 - -
Pvu10g1615 288 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11 9 254 - -
Pvu10g1615 288 SUPERFAMILY DNA-binding domain 9 104 IPR016177 GO:0003677
Pvu10g1615 288 Gene3D - 11 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1615 Pvu-Chr10 42448122 42451645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1615 - - pvu:PHAVU_010G155700g 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1615 10 42448122 42451645 Pvu10g1615 10 42448122 42451645 ECH