Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1611 ATGTTGTCTCAGTTCCTTCAACTATCAGCAGAAACAAACACAACAGATAAAGATAAAAAAACAGCAGTTCAACATCAAGGTCATCATATGGCTTTGTCACGTTTGACTTTGAAAGATTTGCCACAAAGGTTGTTTGCTTCATCTTCCTTAACTGGCCATGGTTGTGGTGGTGTGCACAGGCAGAGGAGGAACAATGAATTGCTCAAAAGGTTTGCCACTGCAGCAGGGGATAAAGGGAAATCTGAAGCCTCTGAAGTTGCTGTTACTGAAGGGAAAAAGTCCAATAAGTTGTTCCCCAGGAGGAGGGGCAGAAGATGGACTTGGAGAAACCATGATCGTGATTTCTCTCCTGCTCTCTATGAGTTCTTTCCTTCGGGGCTTGGGAATGCACTCATGCAGGCAAGTGAGAACATCAACAGGGTGTTTGAGAACATGAATCTGACACCTTGGTCTCTGAGTGGGCGTGTGAAAGAGAGAGATGATCATTACAAGCTGAGGTATGAGATGCCAGGAATGGCAAAAGAGGAGGTGAAGATCACCATTGATGATGGTGTGTTGACAATAAAGGGAGAGCACAAGGAAGAGAAAGAAGAAGGGGAGGAGGATGAGTATTGGTCATCAAGCAGCTATGGATACTATAACACAAGCCTGGTTTTGCCTGATGATGCCAAAGCTGATGACATTAAGGCAGAGCTGAAGGATGGTGTCTTAACTGTTACCATTCCTAGGACTAAGAACCCCAAAAAGGATGTGCAACAAGTCACAATAGAATGA 774 0.4432 MLSQFLQLSAETNTTDKDKKTAVQHQGHHMALSRLTLKDLPQRLFASSSLTGHGCGGVHRQRRNNELLKRFATAAGDKGKSEASEVAVTEGKKSNKLFPRRRGRRWTWRNHDRDFSPALYEFFPSGLGNALMQASENINRVFENMNLTPWSLSGRVKERDDHYKLRYEMPGMAKEEVKITIDDGVLTIKGEHKEEKEEGEEDEYWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLTVTIPRTKNPKKDVQQVTIE* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1611 257 CDD ACD_sHsps-like 156 243 - -
Pvu10g1611 257 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 141 257 IPR002068 -
Pvu10g1611 257 SUPERFAMILY HSP20-like chaperones 142 256 IPR008978 -
Pvu10g1611 257 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 84 257 - -
Pvu10g1611 257 MobiDBLite consensus disorder prediction 1 28 - -
Pvu10g1611 257 Pfam Hsp20/alpha crystallin family 156 256 IPR002068 -
Pvu10g1611 257 Gene3D - 109 257 IPR008978 -
Pvu10g1611 257 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 84 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1611 Pvu-Chr10 42427912 42429378 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1611 K13993 - gmx:100787482 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1611 10 42427912 42429378 Pvu10g1611 10 42427912 42429378 ECH