Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1604 ATGTTCGTTTTCTCTGTAAAACCCTTCTTCATTCTCCTCCTCGTCACGCTCTCACTGTTCTTCCTTCTCGTACTACTATCGCCTCCTTCCCTTCTCTCCCAAAATCTCATTTCTAGTGGGGAGGTGGTGGATATATGGAGTGTTCGGAGACTCGTGGAATGGAGACCTTGCAATTGGTGGCTACAAGGCCACCAAACAGCTCTACCACTAGAAACCAATGGATATATCAGAGTGGATTGCTATGGGGGCCTCAATCAGATGCGAAGAGATTTCTGTGACGGTGTGGGCATTGCTCGTTTGTTAAATGCAACCCTGGTCTTGCCAAAGTTTGAAGTGGCGTCATATTGGAATGAAACAAGCGGTTTTGCTGATGTATATGATGTAGACTACTTCATAGAGCATATGAATGGGTTTGTCAAAGTTGTGAAAGAGTTACCACCAGAGGTTGCATCTAAAGAACCTGTCCGAGTGGACTGTAGCAAACGGAAAGGGCAATTTGATTACGTTGAAAGTGTTCTTCCGTCTTTGTTAGAACACAAGTACATTTCAATCACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTGCTCTCTGTCAAGCCTGTTTCAAAGCATTGCGTCTTTCCAGAACCTTGGAAATGAAAGCCTCTGAGCTTCTAGATGCAATACCAAAACCCTTTTTGTCTCTTCATCTTCGTTTTGAGCCTGACATGGTTGCATACAGCCAGTGCGAGTACACTGGTATTTCTCCTGCTTCCATGAAAGCCATAGAGGCAGCACAAATGGAGAGAAAACCATGGACTGGAGACTTAGCCCGCGTTTGGAGACTACGTGGAAAATGTCCTCTTACACCTAACGAGACAGCTTTGGTACTTCAATCCCTTTCCATCCCACCAACTACAAATATATACCTTGCAGCTGGAGATGGTTTGATGGAAATTGAAGGATTGACAGAAACCTATGGCAACATATTTACTAAGTCAAGTCTTCTTAGTAGGGAAGACTTCACAAACATGCATGGCAATACAAAAGCTGCTCTGGATTATTATGTGTCTATCAACAGTGATTCTTATGTAGCTACATATTTTGGGAACATGGATAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGTTTGTACAAGACTTTATTTTTGAGCAGAAGAGGCTTTGCAGAATTAACCTCAAAGGGTCTTAGGGGAAAGGAGTTGATGACAGCACTGTGGAAGGTTCACAGAGATGATTTTGCCATGGGAAGAGGCTCTGCTCTGCCCGAGTGCTTTTGCGAATTCAAGTTGTGA 1314 0.4368 MFVFSVKPFFILLLVTLSLFFLLVLLSPPSLLSQNLISSGEVVDIWSVRRLVEWRPCNWWLQGHQTALPLETNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDVDYFIEHMNGFVKVVKELPPEVASKEPVRVDCSKRKGQFDYVESVLPSLLEHKYISITPAMSQRRDRYPLYAKAALCQACFKALRLSRTLEMKASELLDAIPKPFLSLHLRFEPDMVAYSQCEYTGISPASMKAIEAAQMERKPWTGDLARVWRLRGKCPLTPNETALVLQSLSIPPTTNIYLAAGDGLMEIEGLTETYGNIFTKSSLLSREDFTNMHGNTKAALDYYVSINSDSYVATYFGNMDKMVAAMRAFKGLYKTLFLSRRGFAELTSKGLRGKELMTALWKVHRDDFAMGRGSALPECFCEFKL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1604 437 Pfam GDP-fucose protein O-fucosyltransferase 75 381 IPR019378 -
Pvu10g1604 437 CDD O-FucT_plant 75 387 IPR024709 -
Pvu10g1604 437 PANTHER OS02G0726500 PROTEIN-RELATED 5 436 - -
Pvu10g1604 437 PANTHER O-FUCOSYLTRANSFERASE 13 5 436 - -
Pvu10g1604 437 PIRSF UCP009360 2 436 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1604 Pvu-Chr10 42370237 42373548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1604 69 407 Miscellaneous Gene Families AT1G22460 35.328 3.94e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1604 - - gmx:100801207 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1604 10 42370237 42373548 Pvu10g1604 10 42370237 42373548 ECH