Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1596 ATGAAAACAATGGCGTTATTCTCTGCAACTGCTGCAACCGTTATTCCTCGAAACCTCGCCATCGCTTCTTCCTCCAAACACTTCCTAGCTCATTCTCTTCTTCCTTCTTTTCCTCGCTTCGTCTCATTCCCCACTCCCAAATCAAACCCTCGCAATCTTCGAACGGTTTCTCTTCAATCCCCACGCGCACAAGCCAGCGCGTCTCCCTCTCCCTCCGCCACCTTCCACGGCCTCTGCTACGTCGTCGGCGACAACATCGACACGGACCAGATCATCCCCGCGGAATACCTCACCCTCGTTCCTTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTCGTCGGCCTCCCGGCCTCCTACGCCACGCGCTTCGTTGACGCCGGTGAGACCAAGACTAAGTACGCCATCGTCATCGGCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCACTGGGCGCAGCCGGCGTTTCCGCCGTGGTTGCGGAGTCGTACGCGCGGATCTTCTTCCGGAACTCGGTGGCCACCGGCGAGGTGTACCCTCTGGAGTCGGAGAGCCGCCTCTGCGAGGAGTGCCGCACCGGCGATGTTGTCACGATTGAGCTCGGAGAGAGCCGCTTGATCAATCACACCACCGGAAAGGAGTATCGCTTGAATCCGATCGGCGACGCGGGTCCGGTGATTGAGGCTGGTGGCATCTTTGCTTATGCGAGGAAGTCCGGCATGATTCCCTCTCGTTGA 759 0.6034 MKTMALFSATAATVIPRNLAIASSSKHFLAHSLLPSFPRFVSFPTPKSNPRNLRTVSLQSPRAQASASPSPSATFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPASYATRFVDAGETKTKYAIVIGGANFGCGSSREHAPVALGAAGVSAVVAESYARIFFRNSVATGEVYPLESESRLCEECRTGDVVTIELGESRLINHTTGKEYRLNPIGDAGPVIEAGGIFAYARKSGMIPSR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1596 252 CDD IPMI_Swivel 81 208 IPR033940 -
Pvu10g1596 252 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 79 245 IPR011827 GO:0016836
Pvu10g1596 252 PANTHER BNAA05G34440D PROTEIN 15 251 - -
Pvu10g1596 252 SUPERFAMILY LeuD/IlvD-like 75 249 - -
Pvu10g1596 252 Pfam Aconitase C-terminal domain 134 183 IPR000573 -
Pvu10g1596 252 Gene3D Aconitase, domain 4 72 248 IPR015928 -
Pvu10g1596 252 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 15 251 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1596 K01704 - gmx:100782688 377.867