Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1583 ATGGAGGGGAGTGATATATACAGAGCAAGGAATAGTTTACGTGCGAGCAGTTCTACTGCATGGAGAAGGAGCATAATGGAGGGTTTTTCGAGGTCATCTCAGCATGAAGAGGGAGCTGATGAAGAAGCTCTGAAATGGGCTGCACTTGAGAAACTCCCCACTTACAACCGTTTGAAGAAAGGGCTGTTGACCACTTCACGTGGTGTCGCCAGTGAGATTGACATAACTGAACTTGGATTTCGAGAAAGACAGAAACTTTTGGACAGGTTGATCAATGTTGCTGAAGAGGATAATGAGAAGTTTCTGTTGAAGCTCAAGGAACGGATTGATAGAGTTGGGATTGATATTCCAACGATCGAAGTTCGATATGAGCACTTACATGTTGATGCAGAGGCTTATGTGGGAAGCAGAGCTTTGCCTACTTTTGTGAACTTTGTGACTAATATGGTGGAGAGTGTCTTTACTTCTCTCCATATTCTCTCAGGCAAAAAGAAACATGTTACTATCCTTAAAGACGTGAGTGGAATAATCAAACCTCGCAGGATGGCACTGCTTTTGGGTCCTCCAAGTTCAGGAAAAACCACACTCCTTTTAGCCCTGTCAGGAAAACTTGATCCAAATCTTAAGGCATCTGGGAGAGTGACTTATAATGGGCATGGAATGGACGAGTTTGTTCCTCAGAGAACAGCTGCATATATTAGCCAGAATGATGTTCATATTGGAGAAATGACAGTGAGGGAAACCTTGGCATTCTCAGCAAGGTGCCAAGGAGTTGGAACACGTTATGACTTGCTATCTGAGTTGGCCAGAAGAGAAAAAGAAGCAAAGATCAAGCCTGACCCGGATATTGATGTCTACATGAAGGCAGCTGCAACCGGAGGCCAGGAGGCAAGTCTGGTAACAGATTATGTTCTGAAGATTTTGGGGTTGGATATATGTGCTGATACAATGATGGGGGATGAAATGTTGCGCGGTATATCTGGAGGACAGAGGAAACGGGTTACTACAGGGGAGATGTTGGTTGGACCAGCAAATGCTCTGTTCATGGATGAAATATCCACTGGTTTAGACAGTTCCACAACTTTTCAAATTGTGAAGTCTCTCAGGCAATATGTTCACATTCTTGATGGAACTGCAGTTATCTCTTTACTCCAGCCAGCACCAGAGACTTATGAACTTTTTGATGACATTATTCTTATATCTGATGGTCAAATTGTCTACCAAGGACCCCGTGAACATGTTCTTCAATTTTTTGAATCTGTTGGTTTCCAGTGTCCTGAGAGGAAAGGTGTTGCTGACTTTCTACAAGAAGTAACTTCAAGAAAGGATCAAGAGCAGTATTGGATGCACAGAGATGAACCATACAGGTTTGTAACTGTTACTGAATTTGCTGAGGCATTTCAGTCATTCCATGTTGGGAGGAGAATTGGAGAACAGCTTGCAACTCCATTTGACAAGTCCAAGAACCACCCAGCTGCCTTAACCACTGAAAGGTATGGCGTGAACAAGAAGGAATTGTTGAAGGCTAACATCTCAAGAGAGTATTTGCTCATGAAAAGGAATTCCTTTGTTTACTTTTTCAAGCTGTTCCAGCTTACGACCTTGGCAATATTGACCATGACAATGTTTCTGCGAACTGAGATGCATCGGGATAACATGGGTGATGGAGGCGTTTATACTGGTGCTCTATTTTTCGCAGTAGTGATTCTTATGTTTAATGGGTTGGCTGAGATTTCAATGACCATTGTAAAGCTTCCTATTTTCTACAAGCAACGAGACCTTCTATTTTATCCTTCATGGGCATATGCCATTCCCTCATGGATCCTCAAGATCCCTATTACATTTTTAGAAGCTGCTGTTTGGGTATTTCTCACCTACTACGTTATAGGATTTGATCCAAATGTTGGGAGGTTTTTAAAGCAGTACCTTGTGCTACTACTGATAAACCAAATGTCTTCTGGTTTGTTCCGAGCTATTGCAGCACTTGGTAGGAACATGATTGTGGCTAACACATTTGGGTCCTTTGCACTTCTCATTCTTTTTGCATTGGGTGGCTTCGTTCTGTCAAAAAATGATATCAAGAAGTGGTGGATTTGGGGTTACTGGATCTCACCTTTAATGTATGGACAGAATGCAATAGTGGTGAATGAATTCCTTGGAAATAGTTGGAACCACTTCACCCCAAATTCAAATAAGACTTTGGGAATTCAAATTTTGGAGTCTCGTGGGTTCTTCACACATGCATATTGGTACTGGATAGGAATTGGGGCATTGATTGGATTTATCTTCCTCTTCAACATTATGTACACCTTGGCTCTCTCTTACCTAAATCCATTTGATAAGCCACAGGCAACAATAACTGAATCAGAAGGTGGCATGGCTAATGGGAGAGCTCGAGAAGAAGAATTAACATGCTTAGAAAGTTGTGGAAGTGCTAATTCTGTTGTGAGTTGTAGCCGCAGAAAGAATAGAGGAATGGTTCTTCCTTTTGAACCATATTCCATCACATTTGATCAAATAGTGTACTCTGTTGATATGCCACAAGAAATGAAGGAGCAAGGTGTGAGGGAGGAGAAATTGGTGCTTTTGAAAGGTGTGAGTGGTGCATTTTGTCCTGGTGTTCTCACAGCTTTGATGGGTGTAAGTGGTGCTGGTAAAACTACATTGATGGATGTTTTAGCTGGAAGAAAAACTGGTGGGTATATTGAGGGAAACATAAAAGTTTCTGGTTATCCCAAAAGGCAAGAAACATTTGCTCGTATTTCTGGTTATTGTGAGCAGAATGATATCCACTCTCCTCATGTTACCGTCTATGAGTCCTTGGTATACTCTGCATGGCTTCGTTTGACAGCAGAAGTTGAATCCAAGACTAGAAAGATGTTCGTAGAGGAAGTCATGGAACTTGTGGAGTTGAACCCACTGAGGAACTCACTGGTTGGGTTGCCTGGTGTGAGTGGTCTCTCAACAGAACAACGCAAGAGGCTAACAATAGCAGTTGAATTAGTGGCTAATCCGTCCATAATTTTCATGGATGAGCCTACTTCTGGGTTAGATGCTAGAGCTGCAGCAATTGTTATGAGAACAGTCAGGAACACAGTTGACACAGGAAGAACAGTTGTTTGCACCATCCATCAGCCAAGCATAGACATATTTGAAGCTTTTGATGAGTTATTCCTAATGAAGCGTGGAGGACAAGAAATATATGTTGGGCCATTGGGACGCCAATCTAGCCAATTGATCAAATATTTTGAGAGCATTGAAGGGGTTAGTAAAATCAAAGATGGCTACAACCCAGCAACATGGATGTTGGAAGTCACAACTCCAGCACAAGAACTTACTTTAGGTGTTGATTTTCATGAAATATACAGAAATTCTGAGCTCTATAGGAGAAACAAGCAACTTATAGCAGAACTTGGCAACCCTGGTCATGGATCAAAAGATATTGAGTTTCCTACTCAATACGCTCAGTCACTTTTGGTTCAATGTATAGCTTGCTTATGGAAACAACATTGGTCATATTGGCGAAATCCACCATATACTGCTGTCAGATTTCTTTCAACTACTGTTACAGCTCTGATGTTTGGAACTATGTTTTGGGACCTTGGAGGCAAATACTCTAGAAGACAGGACCTATTCAATGCCCTGGGTTCAATGTATAATGCTGTTCTCTTTGTTGGTGTCCAAAATTCTTCCTCTGTACAACCTGTAGTAGCCATTGGAAGAACTGTTTTTTACAGAGAAAGAGCTGCGGGAATGTATTCTGCATTTCCTTATGCACTTGCACAAGTTTTAATAGAGCTACCTTATATTTTTGTGCAAGCTTCAACATATTCTGTCATAGTGTATTCCATGATGGGATTTGAATGGACTTTAGAGAAGTTTTTTTGGTACTTGTTTTTCATGTACTTCACATTGTGCTACTTCACCTTCTATGGCATGATGACTGTGGCAGTCACACCAAATCACCATGTTGCTTCTGTTGTGGCTTCTGCATTTTATGGAATCTGGAACCTGTTTTCAGGATTTGTCATTGCACGACCTAGCATTCCTGTGTGGTGGAGGTGGTATTACTGGGCATGTCCTGTGGCATGGACCATATATGGGTTGGTTGCCTCACAGTTTGGAGATATAACCAATGTGATGAAATTAGAAAATGTTTCAGTGCAAGAGTTCTTAAGAAGTTATTTTGGTTTCAGACATGACTTCATAGGAGTTTCTGCAATCATGGTTTCTGGTTTTGCAGGGTTGTTTGCTATTATTTTTGCTGTCTCAATCAAGGCCTTCAACTTCCAAAAGCGATAG 4302 0.4147 MEGSDIYRARNSLRASSSTAWRRSIMEGFSRSSQHEEGADEEALKWAALEKLPTYNRLKKGLLTTSRGVASEIDITELGFRERQKLLDRLINVAEEDNEKFLLKLKERIDRVGIDIPTIEVRYEHLHVDAEAYVGSRALPTFVNFVTNMVESVFTSLHILSGKKKHVTILKDVSGIIKPRRMALLLGPPSSGKTTLLLALSGKLDPNLKASGRVTYNGHGMDEFVPQRTAAYISQNDVHIGEMTVRETLAFSARCQGVGTRYDLLSELARREKEAKIKPDPDIDVYMKAAATGGQEASLVTDYVLKILGLDICADTMMGDEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVKSLRQYVHILDGTAVISLLQPAPETYELFDDIILISDGQIVYQGPREHVLQFFESVGFQCPERKGVADFLQEVTSRKDQEQYWMHRDEPYRFVTVTEFAEAFQSFHVGRRIGEQLATPFDKSKNHPAALTTERYGVNKKELLKANISREYLLMKRNSFVYFFKLFQLTTLAILTMTMFLRTEMHRDNMGDGGVYTGALFFAVVILMFNGLAEISMTIVKLPIFYKQRDLLFYPSWAYAIPSWILKIPITFLEAAVWVFLTYYVIGFDPNVGRFLKQYLVLLLINQMSSGLFRAIAALGRNMIVANTFGSFALLILFALGGFVLSKNDIKKWWIWGYWISPLMYGQNAIVVNEFLGNSWNHFTPNSNKTLGIQILESRGFFTHAYWYWIGIGALIGFIFLFNIMYTLALSYLNPFDKPQATITESEGGMANGRAREEELTCLESCGSANSVVSCSRRKNRGMVLPFEPYSITFDQIVYSVDMPQEMKEQGVREEKLVLLKGVSGAFCPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNIKVSGYPKRQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLTAEVESKTRKMFVEEVMELVELNPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRQSSQLIKYFESIEGVSKIKDGYNPATWMLEVTTPAQELTLGVDFHEIYRNSELYRRNKQLIAELGNPGHGSKDIEFPTQYAQSLLVQCIACLWKQHWSYWRNPPYTAVRFLSTTVTALMFGTMFWDLGGKYSRRQDLFNALGSMYNAVLFVGVQNSSSVQPVVAIGRTVFYRERAAGMYSAFPYALAQVLIELPYIFVQASTYSVIVYSMMGFEWTLEKFFWYLFFMYFTLCYFTFYGMMTVAVTPNHHVASVVASAFYGIWNLFSGFVIARPSIPVWWRWYYWACPVAWTIYGLVASQFGDITNVMKLENVSVQEFLRSYFGFRHDFIGVSAIMVSGFAGLFAIIFAVSIKAFNFQKR* 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1583 1433 Pfam ABC-transporter N-terminal 85 145 IPR029481 -
Pvu10g1583 1433 Gene3D - 849 1081 IPR027417 -
Pvu10g1583 1433 Gene3D - 154 462 IPR027417 -
Pvu10g1583 1433 Pfam Plant PDR ABC transporter associated 723 786 IPR013581 -
Pvu10g1583 1433 Pfam ABC transporter 863 1015 IPR003439 GO:0005524
Pvu10g1583 1433 Pfam ABC transporter 170 352 IPR003439 GO:0005524
Pvu10g1583 1433 Pfam ABC-2 type transporter 1161 1374 IPR013525 GO:0016020|GO:0140359
Pvu10g1583 1433 Pfam ABC-2 type transporter 506 718 IPR013525 GO:0016020|GO:0140359
Pvu10g1583 1433 CDD ABCG_PDR_domain1 157 409 IPR034001 -
Pvu10g1583 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 427 IPR003439 GO:0005524
Pvu10g1583 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 857 1071 IPR027417 -
Pvu10g1583 1433 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1433 - -
Pvu10g1583 1433 SUPERFAMILY Calcium ATPase, transmembrane domain M 496 1393 IPR023298 -
Pvu10g1583 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 427 IPR027417 -
Pvu10g1583 1433 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1433 - -
Pvu10g1583 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 835 1087 IPR003439 GO:0005524
Pvu10g1583 1433 CDD ABCG_PDR_domain2 832 1070 IPR034003 -
Pvu10g1583 1433 SMART AAA_5 872 1064 IPR003593 -
Pvu10g1583 1433 SMART AAA_5 179 411 IPR003593 -
Pvu10g1583 1433 Pfam ABC-2 type transporter 385 438 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1583 Pvu-Chr10 42229525 42237800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1583 K08711 - gmx:100783377 2603.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1791 5 39686502 39693803 Pvu10g1583 10 42229525 42237800 PCT