Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1581 ATGGGTTCAGAAGACACTCCAAAGCTTCCAGTAATCAACTTTACTGACCTCAAACTGGAGGCCAAGGACCCTAATTGGGAGGCAGTGAAGTCCCAAGTCCACAGGGCACTTGTGGAGTTTGGTTGCTTTGAAGCAGTTTTTGATAGAGTTCCTTTAGAGCTTAGAAAAGCCATTTTAGGTTCACTTCAAGAACTCTTTGATCTCCCTCTGCAAACAAAGCTACTCAATGTGTCTAAGAAGCTTTTTCATGGTTATGTTGGGCAATATCCTATGGTTCCACTTTTTGAAAGCATGGGCATTGATGATGCAGTTGTGTATGAGGAAGTAGAAAGCTTGACCAACACCATGTGGCCTAATGGAAACCCAAATTTTAGCAAAACTATACAATCTTTCTCTGAGGAGCTAGCAGAGTTGGATCAGATTATTAGGAAGATGGTTTTGGAGAGCTTGGGTGTTGAGAAGTACTTGGAGGAGCACATGAACTCAACCAATTATCTCCTGAGGGTTATGAAATACCAAGGCCCTCAAACCAGTGACACAAAGCTGGGCCTCAGCGCACACACAGACAAGAACATAGTGACCATATTGTACCAAAATGAAGTGGAGGGTTTAGAGGTGTTGACCAAAGATGGAACATGGATAAGCTACAAGCCTTCCCCTCACAGTTTTGTTGTCATGATTGGTGACTCTTTCAATGCATGGGCAAATGGGAGGTTGCATTCACCCTTTCATAGAGTGATGATGAGTGGAAATGAGACAAGATACTCTGCAGGGTTGTTCTCTATCCCTAAAGGAGGGAGCATAATAAAAGCCCCAGAGGAGCTGGTGGATGAGGAACACCCTCTGCTTTTCAAACCCTTTGATCATATGGAGTTTCTCAAGTATTATTACACTGAAAAAGGACAGAGAGATCAGTTTGCACTGCTCACTTACTGTGGTGTTTGA 945 0.4328 MGSEDTPKLPVINFTDLKLEAKDPNWEAVKSQVHRALVEFGCFEAVFDRVPLELRKAILGSLQELFDLPLQTKLLNVSKKLFHGYVGQYPMVPLFESMGIDDAVVYEEVESLTNTMWPNGNPNFSKTIQSFSEELAELDQIIRKMVLESLGVEKYLEEHMNSTNYLLRVMKYQGPQTSDTKLGLSAHTDKNIVTILYQNEVEGLEVLTKDGTWISYKPSPHSFVVMIGDSFNAWANGRLHSPFHRVMMSGNETRYSAGLFSIPKGGSIIKAPEELVDEEHPLLFKPFDHMEFLKYYYTEKGQRDQFALLTYCGV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1581 314 SUPERFAMILY Clavaminate synthase-like 5 301 - -
Pvu10g1581 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 313 - -
Pvu10g1581 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Pvu10g1581 314 Pfam 2OG-Fe(II) oxygenase superfamily 159 260 IPR044861 -
Pvu10g1581 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 263 IPR005123 -
Pvu10g1581 314 Gene3D - 1 305 IPR027443 -
Pvu10g1581 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 6 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1581 Pvu-Chr10 42204959 42206625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1581 8 297 Glycosyltransferase AT5G59530 23.667 7.54e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1581 - - gmx:100784444 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1581 10 42204959 42206625 Pvu10g1581 10 42204959 42206625 ECH