Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1560 ATGTTTCGGTGGCTATTGAAGCCCAGGTTCGATTCAAAATGTTTGTCTTACCTGAAGTCTTTGAAGATTCGGTTGGGGAGAGTGCAGAATAGGAAGAAAGCAGAAGTGAAGTTTTTGAAGAGTGTCATTGCAGAGCTTCTCACCATTGGCCTTGAAGACGATGCATACACAAGGGCTAAGGAGCTTCTGTTAGAGCAGAAAACGTTATCCTCCTATGAACTCATTGAAAAATTTGTTGGGTGCATATCAGATCATGTTGAAGACTTTACAAAGCAGAAGGATTGCCCTGAAGAATGCAAGGAAGCTGTGTCATCATTGATGGATGCTGCTGCAAGAACTGGTGATCTGCCAGAATTGCGTCAGCTCAGAACATTATTTACTGACAAATATGGGAATTCTCTTGAACCTTATGCAAACAAAGAGCTTGTTGAGAGTCTGAGAAAAGATCCACCCACAAGAGAAATTAAGATTGGACTATTACATGATATAGCACAAGATTTTTCCATAGAATGGAATGACAAGTCTTTGAGAGAAAGACTTTATCCACAGTCGTCATTACGTGAAGAGAAGCCTATTGCTGGAGAAGACTTCAATACACCAAAAGGAAAGGAAAGAGACACCCAACATCTTGGAAGGAAGAATTTGAGTGGTGAGAGATGGATGCATCAAAACAGTAGCAGTGATGATGAAACAAGCATGTCATCACATGATGGCAGAAAGGGTAGAAGTTCAAGTTCATTTGGAAGCATATCTGAGGATGAAGTTGAAACCAACATGCCAATTTCTTCCTACTGGGGCATTCCACCTCCCTACCTCAAACAAAAGACCAACAAGAGTGATTCAAAGAAACCAACACATGCTGACACTGCAACAGCACCAGATTCAGGTGGAGTGAAATCAGGCAAAGGAAAAGGTTATCCTTCTCAACAACCAGAACATGGTACTGGGCAAATCAGAAGGCGTAGAAGCTCACATGTCAGAGGTAAATCTCTTCCCTCTGAACCCAACACTGCAGAGGAAACATCAAAAGGGCATATACGAACAGTTTCCTTAGAATCGGGAATGCGGGGTGGTGCATCGCATGTGCATCCGAAACTACCCGATTATGATGATTTGAGAGCTCATTTTTTAGCTCTCAGAAAGAGATGA 1149 0.4212 MFRWLLKPRFDSKCLSYLKSLKIRLGRVQNRKKAEVKFLKSVIAELLTIGLEDDAYTRAKELLLEQKTLSSYELIEKFVGCISDHVEDFTKQKDCPEECKEAVSSLMDAAARTGDLPELRQLRTLFTDKYGNSLEPYANKELVESLRKDPPTREIKIGLLHDIAQDFSIEWNDKSLRERLYPQSSLREEKPIAGEDFNTPKGKERDTQHLGRKNLSGERWMHQNSSSDDETSMSSHDGRKGRSSSSFGSISEDEVETNMPISSYWGIPPPYLKQKTNKSDSKKPTHADTATAPDSGGVKSGKGKGYPSQQPEHGTGQIRRRRSSHVRGKSLPSEPNTAEETSKGHIRTVSLESGMRGGASHVHPKLPDYDDLRAHFLALRKR* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1560 382 Pfam Regulator of Vps4 activity in the MVB pathway 18 169 IPR005061 GO:0015031
Pvu10g1560 382 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 9 381 - -
Pvu10g1560 382 MobiDBLite consensus disorder prediction 238 258 - -
Pvu10g1560 382 Gene3D - 4 179 IPR042277 -
Pvu10g1560 382 PANTHER IST1 FAMILY MEMBER 9 381 IPR005061 GO:0015031
Pvu10g1560 382 MobiDBLite consensus disorder prediction 187 216 - -
Pvu10g1560 382 MobiDBLite consensus disorder prediction 329 348 - -
Pvu10g1560 382 MobiDBLite consensus disorder prediction 187 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1560 Pvu-Chr10 42019206 42021899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1560 - - pvu:PHAVU_010G150200g 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1560 10 42019206 42021899 Pvu10g1560 10 42019206 42021899 ECH