Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1552 ATGAACATGCCGCCGAAGCCGAACCAGGTGGTAGTGAGAGACCTCGTTGAGGAAGCCAAGAAACGGATCGTCATACTCGTCGTATGCGTCGTCGGAATCTCCTATCTCATGTCCTTGACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCAGCAGCCTCCTTGATTATTATTCTCCGCTATTTGTCGCTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGGTCCGTCAATGTTCAGTCTTCAAAGAAGCCCATGGAAAATCCTAAAGTTATTGCAAAGTTTGAGTGGAGAAAAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCAGGCATTTAATTTCTGAGTGGGTGACAGATCTTTGGTATTCTCGCTTAACACCAGACAAAGAGGGTCCTGAGGAGTTAGTGCAAATAATTAATGGTGTTCTTGGGGAAATTTCAGGACGCATGAGAAACATAAACTTGATGGATTTTTTGATAAGGGATCTTGTTAATATTATTTGCACACACTTGGAGGTGTTTCGTGCTGCCCATTCAAAGATTGAAAAACATCATACAGGTCCATTAACAATTGCAAGTCGAGACATGGAATTGAAAATTGTTTTGGCTGCTGAGAACAAATTGCATCCTGCTTTGTTTTCTGCAGAAGCTGAGCATAAGGTTTTACAGCATCTGATGACCGGTCTAATGCATTCTACTTTCAAGTCTGAGGATTTGAAGTGTTCTTTCTTTCGATATGCTGTCAGGGAGCTTCTTGCATGTGCTGTAATACGACCTGTCCTAAACTTAGCAAATCCAAGATTTCTTAACGAGAGAATTGAATCTGTGGTAGTTAACAAGACCAGGGTTAACAAGGGGGTTGCTGCTGCTCAAGAGGCATCTCACACTAAAGTAGATGAGTTACAGGTTTCTTCTCATGATTTCTCCAAGACTTCAGATCCTTCTGTTACTGGTGTTGAGCTTGTGCAGCTAAAAAATGGTCAATCCAGAAATGTAGAGACTTCTGCAGAACATAATGCTCGTGATAATAGTATTAAAGATCCATTGCTTTCAGTTTCAGTTGATACTCGATCTTCCCGTACATGGAGCTCATTGCCTGCAAACCCCCAAACTATTGACGATCAAAATATTCAACGACAACGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCATCTCTCGCAGAAAGACCCAAGCTCTTGCTCCGGAACATTTTGAGAATGTGTGGACTAAAGGGAAAAATTACAAGAAAAAGGATGGTGAGAACCAGTCAAATGAGCACATTTCACAGCATCCTGTGGTAGGGAAACTGCCGAAGGTAGATCACATGAAAGCAATATCTAGACCTAAACAAAGAGATACTAATTCCAAGCTTATTCCCCCCAAGGGACGCCACATTAATTCTGGACACAGTAGTCAATTCTCTGTTGAAAATACATCCATTCATGCGGACAAGAATGGATCAAGTTCAGTTACCTCATATAAAGACAATGAGTCCGTTACATCATATCAAAATGACGAGAGCATCCACATTTATGGGCAGATAAGTGATTCAGGGAGCAGTACATCTTATACTTCTGAAGATGATGATGAAAGTAGTACAGTTACTGGTCTTGATACCCCTGTCACTAAGGTTTGGGATGGAAGAAGTAATAGAAACCAGGCAGTTTCTTATGTTCATCACCCACTTGAAATTTTTGACAATCACAGTGCAAAGAAAAGGAATAAGAGACATTCTCACTATCCAAGACTATCCAGAGCCCAATCTGGCAATAAAAGGTCTTGGTCAGGTGGTCATAAAATGCAAACGTGGCAAGAAGTTGAGAGGACAAGCTTTTTATCTGGAGATGGTCAAGACATACTTAATTCTTCAAAATCACATATAGATTCTGAGGAGTCCAGTGATGATGCTGATATTGAAAGATTGGGCAGACTTTATAGTGGAGCAGCAGCCTCTTCTTCTGCCCACTCTATTTCTAAAACAGAATCTTGTAGTTTGTCTGTTACTCCCCTGAAAAGTTCCTCTGCAGTAGATTCCTTTTACAAGTTGAGATGTGAGGTCTTGGGTGCAAATATTGTCAAGAGCGGCTCTAAAACCTTTGCTGTTTATTCCATATCCGTTACAGATATAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATAGACGCCTGAAAGAGTTTCCTGAGTATAACCTTCATTTACCACCAAAACATTTTCTATCGACTGGTTTAGACGTACCAGTCATTCAAGAGCGCTGTGAATTACTGGATAAATATTTGAAGAAACTTATGCAACTACCAACTGTTTCGGAATCAATTGAAGTATGGGACTTTCTCAGTGTCGATTCTCAGACTTACATATTCTCAAATTCTTTTTCTATCATGGAAACATTATCAGCTGGCTTGGATGCCAAGCCATTTGAGAAGAATAAAAACACTTCTCACTCTTCTGTACCTGCAAGTGATCCTGTGTCCTTTTGGAGAGAAAACTGTAGTGCTGAAAGTAAAGAGTCTGTTATGAAAGCAAAAAATAATGTTGAGGCCGATGGATTGAGGTCAAAAGTAAACAGCATGCCTCTTTCTCTACCAAAAAAGAATACACATCAACCTATAAAGTCATTTGAAAATTCTAGCGGCAATACAGATGTTCTAGCACAGAAGAGTGCACCTTCTCCCAATAACTTGCAAAAGACAGTGAAAGGAAGAGATAATTTGAATGAGGCTTCTGAAGTGCACCGTGATACTTCTGATGTTTTTCCAACAGAGTGGGTGCCGCCAAATTTGAGTGTACCTATATTGGATTTGGTTGACGTTATCTTCCAGGTTCAAGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGTGACGCATTTGATGACTGGTTGATTGAGAAAATCCAACTTCTTCGTAAGGGATCAGTGATTGCTACAGGGGTCAAGCGAGTTGAGCAAATACTCTGGCCTGATGGAATATTCATAACCAAGCATCCAAGTAGAAGACCACCGACACCAGCTACAAGCCCAACTCAAAATTCTCCTCGTGGTAATCAAACTACACAAGTATCTTCTCCAAGGTTGGAAGATGAACAGAAACGGGAGGCAGATCGGCGTGCAAAATTTGTATATGAGCTAATGATTGATCATGCACCACCAGCAATTGTAGGTCTTGTTGGTCGGAAGGAGTACGAGCAATGTGCTAGAGATCTATATTTTTTCCTTCAGTCATCCGTTTGCTTGAAGCAGCTGGCTTTTGACATCCTGGAGCTGCTTCTGACGTCAGCATTTCCAGAGCTTGATGATATTTTCAAGCAGCTGCACGACGAAAAGCATAAATTTGGTGAGTTCAAACCACAGTAA 3438 0.4087 MNMPPKPNQVVVRDLVEEAKKRIVILVVCVVGISYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKAAAYNNKAGSVNVQSSKKPMENPKVIAKFEWRKKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLMDFLIRDLVNIICTHLEVFRAAHSKIEKHHTGPLTIASRDMELKIVLAAENKLHPALFSAEAEHKVLQHLMTGLMHSTFKSEDLKCSFFRYAVRELLACAVIRPVLNLANPRFLNERIESVVVNKTRVNKGVAAAQEASHTKVDELQVSSHDFSKTSDPSVTGVELVQLKNGQSRNVETSAEHNARDNSIKDPLLSVSVDTRSSRTWSSLPANPQTIDDQNIQRQRSGGEWGDILDVISRRKTQALAPEHFENVWTKGKNYKKKDGENQSNEHISQHPVVGKLPKVDHMKAISRPKQRDTNSKLIPPKGRHINSGHSSQFSVENTSIHADKNGSSSVTSYKDNESVTSYQNDESIHIYGQISDSGSSTSYTSEDDDESSTVTGLDTPVTKVWDGRSNRNQAVSYVHHPLEIFDNHSAKKRNKRHSHYPRLSRAQSGNKRSWSGGHKMQTWQEVERTSFLSGDGQDILNSSKSHIDSEESSDDADIERLGRLYSGAAASSSAHSISKTESCSLSVTPLKSSSAVDSFYKLRCEVLGANIVKSGSKTFAVYSISVTDINNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLMQLPTVSESIEVWDFLSVDSQTYIFSNSFSIMETLSAGLDAKPFEKNKNTSHSSVPASDPVSFWRENCSAESKESVMKAKNNVEADGLRSKVNSMPLSLPKKNTHQPIKSFENSSGNTDVLAQKSAPSPNNLQKTVKGRDNLNEASEVHRDTSDVFPTEWVPPNLSVPILDLVDVIFQVQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIATGVKRVEQILWPDGIFITKHPSRRPPTPATSPTQNSPRGNQTTQVSSPRLEDEQKREADRRAKFVYELMIDHAPPAIVGLVGRKEYEQCARDLYFFLQSSVCLKQLAFDILELLLTSAFPELDDIFKQLHDEKHKFGEFKPQ* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 455 511 - -
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 455 469 - -
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 873 912 - -
Pvu10g1552 1145 ProSiteProfiles PXA domain profile. 107 286 IPR003114 -
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 476 511 - -
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 876 912 - -
Pvu10g1552 1145 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 8 1142 - -
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 1036 1051 - -
Pvu10g1552 1145 Pfam Sorting nexin C terminal 964 1103 IPR013937 -
Pvu10g1552 1145 PANTHER PX SERINE/THREONINE KINASE PXK 8 1142 - -
Pvu10g1552 1145 SMART PX_2 695 799 IPR001683 GO:0035091
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 577 610 - -
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 524 550 - -
Pvu10g1552 1145 Gene3D - 691 807 IPR036871 GO:0035091
Pvu10g1552 1145 SUPERFAMILY PX domain 692 800 IPR036871 GO:0035091
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 1020 1058 - -
Pvu10g1552 1145 MobiDBLite consensus disorder prediction 594 610 - -
Pvu10g1552 1145 CDD PX_SNX19_like_plant 693 797 - -
Pvu10g1552 1145 Pfam PX domain 721 799 IPR001683 GO:0035091
Pvu10g1552 1145 ProSiteProfiles PX domain profile. 691 803 IPR001683 GO:0035091
Pvu10g1552 1145 Pfam PXA domain 107 284 IPR003114 -
Pvu10g1552 1145 SMART PXA_3 111 290 IPR003114 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1552 Pvu-Chr10 41973790 41981827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1552 K17925 - gmx:100790491 1947.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1552 10 41973790 41981827 Pvu10g1552 10 41973790 41981827 ECH