LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu10g1547	ATGGTTAAAGCAATGGAACAAGAACAGGAAGGTTACAGGTCCAAACTATTCAATTTCAAAGGAATGTTTGACAATGCTGGGAGGCATACAAAGAGTCTTAGCGTTGAGAGTGCCACTGCATTAGATCCTTCTCCTTCTGAGGAAGATCCAGTGTCATCAAAATGTCAAGGATCAAAATCTCTTAATGATCCTGATAAGGCTCCTAAGCCAAGGGTAAACAAGGAGGAAATTGTAGCCAAAGAAGCCAAAGATAAACTAGTGCAAGAATTGGAACAGATGAAGGAGAGATTTGCTAAACTCCTGTTGGGGGAGGATATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCTCTGGCATTGTCAAATGCATTCACAAATCTTGCAGCTGCTGTTTTTGGAGAGCAAAAGCGTCTAGAGCCGATGCCCCCGGAGAGGAAGGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACCGATTACATTGTTGAAATGGTTCCTGTGCAACAGAAAAACAAGGATGGCTCAATGATGGAGGTTATGACAACACGACAGAGAACTGATCTCCACATGAATATCCCTGCCTTAAGAAAGCTTGATACCATGCTTATTGACAGTCTGGATAACTTCAAAGACCAAACCGAGTTCTATTATGTATCAAAAGATGCAGATGATCCTGATAATAGAAAAAACGATAACAAGTGGTGGTTGCCTACACCAAAGGTTCCCCCAGAGGGTCTATCTGATGCAGCAAGAAGGTTTGTGCAGTATCAGAAAGATTGTGTGAACCAAGTACTTAAAGCAGCTATGGCCATAAATGCTCAAACTCTTTCAGAAATGGAGATCCCTGAAAGCTACATTGAATCCCTGCCCAAGAATGGAAGATCAAGTCTAGGGGACATGATATACAGGAGCATTACAGAGGAATTTTTCGACCCTGATCAGCTCCTAGCATCTATGGACATGACATCAGAACACAAAATCCTAGATCTCAAGGACAGAATTGAGGCATCCATTGTGATTTGGAGACGGAAGATGAACCAAAAAGACTGTAAATCAGCTTGGGGTTCTGCTGTGAGTATTGAGAAGAGAGAACTCTTTGAAGAGAGAGCAGAAACCATCTTACTTCTCCTAAAGCATCGTTTCCCAGGGATTCCCCAATCTGCATTGGATATAAGCAAAATCCAATTCAACAGGGATGTGGGGCAAGCTGTTCTTGAAAGTTATTCTAGGATATTGGAGAGTTTGGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTCCATGCAGATTTCCTCACTCAAAATCCACCACAATCAAGCAGAAGAAGTGTTTCCAGAAACACAACTTCGAAGCCAGATAAATCTCCAACTCCTAAAGAGGAGGTGGAAAAGGGTGGCTCAGAAACAATGACACTATCAGATTTCATGGGTTGGAGCAGTGATCAAGGTGACTCAGACACTAAGAGAGACCCCTCAGATGACCTCTACAATGACATGGATAATGGAAAGCCCCAAAAACTTCCAGATGTAGTTACTGACAAGAAAGTGTCCTACCTTGAGACATTGGGAGGTATGAGAAGTCCTACGGCACGCCATTGA	1602	0.4276	MVKAMEQEQEGYRSKLFNFKGMFDNAGRHTKSLSVESATALDPSPSEEDPVSSKCQGSKSLNDPDKAPKPRVNKEEIVAKEAKDKLVQELEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGSMMEVMTTRQRTDLHMNIPALRKLDTMLIDSLDNFKDQTEFYYVSKDADDPDNRKNDNKWWLPTPKVPPEGLSDAARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRSSLGDMIYRSITEEFFDPDQLLASMDMTSEHKILDLKDRIEASIVIWRRKMNQKDCKSAWGSAVSIEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNRDVGQAVLESYSRILESLAFTVLSRIEDVLHADFLTQNPPQSSRRSVSRNTTSKPDKSPTPKEEVEKGGSETMTLSDFMGWSSDQGDSDTKRDPSDDLYNDMDNGKPQKLPDVVTDKKVSYLETLGGMRSPTARH*	534

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu10g1547	533	MobiDBLite	consensus disorder prediction	484	501	-	-
	Pvu10g1547	533	MobiDBLite	consensus disorder prediction	434	513	-	-
	Pvu10g1547	533	PANTHER	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	88	533	IPR038937	GO:0005085
	Pvu10g1547	533	Pfam	PRONE (Plant-specific Rop nucleotide exchanger)	89	435	IPR005512	GO:0005085
	Pvu10g1547	533	Gene3D	PRONE domain, subdomain 1	94	431	-	-
	Pvu10g1547	533	ProSiteProfiles	PRONE domain profile.	80	441	IPR005512	GO:0005085
	Pvu10g1547	533	MobiDBLite	consensus disorder prediction	33	75	-	-
	Pvu10g1547	533	Gene3D	PRONE domain, subdomain 2	281	397	-	-
	Pvu10g1547	533	PANTHER	RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR	88	533	-	-
	Pvu10g1547	533	Coils	Coil	72	96	-	-
	Pvu10g1547	533	MobiDBLite	consensus disorder prediction	454	468	-	-
	Pvu10g1547	533	MobiDBLite	consensus disorder prediction	434	453	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu10g1547	Pvu-Chr10	41944963	41948471	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu10g1547	-		-	gmx:100777496	899.427