Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1538 ATGGAGAAGCAAGTGGAGCTTTCTTCAACTCAATTTGAAATGGCTTCTCAACACCTTCAACAACCCCAGAGGAAAAAGGGTGGTTTTGTCACCATGCCTTTCATCATGGCAAATGAGGCACTTGCAAGAGTTGCAACATTTGGTCTTCTGCCAAACATGGTGGTGTATTTGATGGGGACTTACAACTTTCATTTGGCCAAAGCAACCCAAGTGCTTCTATTGTCCTCTGCAACAAGCAACATCACACCACTCATAGGTGCTTTCATTGCTGATTCTTGCTTGGGTCGATTCCTCTCTGTTGGGTTAGGATCCACCATCACTTTCCTGGGAATGATACTCTTGTGGCTAACAGCCATGATTCCACAAGCTCAGCCTCCTCCTTGCAACCTAGAAACTGAAAGATGTAAATCAGCAACAACTGGGCAAATGGCAATGCTAATCTCTTCCTTTGCTCTCATGTCATTTGGAAATGGTGGCCTTTCATGTTCCATGCCATTTGGTGCAGACCAGGTCAACAAAAAGGATAACCCCAACAACCACAGGGTCTTGGAAACATTTTTCAGCTGGTATTATGCTTTTACAGCTTTTGCTGTCATAATTGCCCTCACAGTCATAGTATATATCCAAGATCATTATGGGTGGAAAGTGGGTTTTGGTGTTCCAGCAGTACTTATGTTCATGTCCACTTTATTCTTTTTCCTTGCTTCTCCACTATATGTAAAGAATAAAGTTATGGGCAGCTTAATCACTGGCCTTGCACAAGTAACTGTTGTGGCCTATAAGAACCGGAATCTTCCTTTACCACCTAGGAACTCAGTTGAAATGTACCATCGTAGGAAGGACTCTGATCTTCTTGTTCCTGCTGATAAACTAAGGTTTCTGAATAAAGCTTGTATCATTCAAGATCCTGAGAAAGATATAGCATGTGATGGATCAGCCTCAGATCCGTGGAGTCTCTGCACAATAGAACAAGTGGAAGAACTAAAAGCTATTATTAAAGTTATTCCACTGTGGTCTTCAGGGATCATGGTGTCAATTAACATTGGAGGCTCTTTTGGAATACTGCAAGCTAAATCCCTCAACAGGCACATCACTTCACACTTTGAAGTTCCAGCAGGTTCTTTTTCTGTAGTCTTGGTGATTACAATATTTATATGGCTGGCTCTTTATGATAGGGCCATTATTCCTCTAGCATCAAAGCTCATAGGCAAACCGGTTAGGATCAGTGCCAAGAGAAGAATGGGAATTGGGTTGGGTTTCTCTTTACTCCACTTTTCAACTGCAGCTATTGTGGAGACTACAAGGAGAAGGAGAGCAATCAAAGAGGGACATGTTAATGATGTGCATGCAGTGTTGAATATGTCTGGAATGTGGCTTGTTCCTCAACTTTTCTTGGCAGGCATGGCAGAAGCATTCAATGCCATAGGCCAAAATGAGTTCTATTACACAGAGTTTCCTAGCACTATGTCAAGTATTGCCTCTTGCCTTTTTGGACTTGGAATGGCTGCAGGAAGTGCTTTATCTAGTTTGATATTCAGCACTGTGGAACATGTTACTTCAAGAGGAGGAAAGGAGGGATGGATTTTAGATAATATTAACAAGGGTCGTTATGACAAGTACTACTGGGTGCTTGCTCTGCTGAATGCTGTTAATATACTCTATTATCTAGTATGCAGTTGGGCTTATGGACCCACACATGATCAACTATCCAAGTTGTCTGATGAAAATACTTCAAATGAGAAACCATAA 1749 0.418 MEKQVELSSTQFEMASQHLQQPQRKKGGFVTMPFIMANEALARVATFGLLPNMVVYLMGTYNFHLAKATQVLLLSSATSNITPLIGAFIADSCLGRFLSVGLGSTITFLGMILLWLTAMIPQAQPPPCNLETERCKSATTGQMAMLISSFALMSFGNGGLSCSMPFGADQVNKKDNPNNHRVLETFFSWYYAFTAFAVIIALTVIVYIQDHYGWKVGFGVPAVLMFMSTLFFFLASPLYVKNKVMGSLITGLAQVTVVAYKNRNLPLPPRNSVEMYHRRKDSDLLVPADKLRFLNKACIIQDPEKDIACDGSASDPWSLCTIEQVEELKAIIKVIPLWSSGIMVSINIGGSFGILQAKSLNRHITSHFEVPAGSFSVVLVITIFIWLALYDRAIIPLASKLIGKPVRISAKRRMGIGLGFSLLHFSTAAIVETTRRRRAIKEGHVNDVHAVLNMSGMWLVPQLFLAGMAEAFNAIGQNEFYYTEFPSTMSSIASCLFGLGMAAGSALSSLIFSTVEHVTSRGGKEGWILDNINKGRYDKYYWVLALLNAVNILYYLVCSWAYGPTHDQLSKLSDENTSNEKP* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1538 582 PANTHER PEPTIDE/NITRATE TRANSPORTER 16 573 - -
Pvu10g1538 582 CDD MFS_NPF1_2 32 562 - -
Pvu10g1538 582 Gene3D MFS general substrate transporter like domains 3 571 IPR036259 -
Pvu10g1538 582 SUPERFAMILY MFS general substrate transporter 23 559 IPR036259 -
Pvu10g1538 582 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 573 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g1538 582 Pfam POT family 101 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1538 Pvu-Chr10 41885384 41889139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1538 13 569 Organic Solute Cotransporters AT1G52190 55.556 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1538 - K14638 gmx:100805115 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1747 5 39334268 39337554 Pvu10g1538 10 41885384 41889139 PCT