Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1536 ATGGCAAAAGATTGGAAGCAAACAGCTCTTCTTGTCATCGACATGCAGAAAGATTTCATAGAAGATTGGAGTCCTGTGGCACTAAAAGCAGGGAAAAACATTGTTCCAAATGTGGTTAAGGCTGTGGAAATTGCCAGAGAGCGTGGCATTCTCATAGTTTGGGTAGTACGAGAAAACGATCCCTTAGGAAGAGATGTTGAGCTTTTTCGTAGACATTATTATACAGAGATGAAAGTTAAAATAGGGTGTAAAGGAAGTGAAGGTGCAGGATTAGTTGATGGGTTGCTGATTAAAGAAGAAGATTATAAACTTGTGAAGAGCAGGTTCAGTGCATTCTTTGCTACACACCTTCATTCAGTTCTTCAAGCTACAGGAATTCATAATCTGGTCATCACTGGAATTCAAACTCCAAATTGTATCAGGCAAACTGTGTTTGATGCTGTAGCATTGGACTATCCACAGGTGACTGTTATTGTTGATGCTACTGCAGCAGCCACACCTGAAGTTCATCAAGCCAATTTGTTTGACATGAAAAATATTGGAGTTGCAACCCAAACATTACAAGAATGGAGCGAAGCCAAGGCTTGA 588 0.4031 MAKDWKQTALLVIDMQKDFIEDWSPVALKAGKNIVPNVVKAVEIARERGILIVWVVRENDPLGRDVELFRRHYYTEMKVKIGCKGSEGAGLVDGLLIKEEDYKLVKSRFSAFFATHLHSVLQATGIHNLVITGIQTPNCIRQTVFDAVALDYPQVTVIVDATAAATPEVHQANLFDMKNIGVATQTLQEWSEAKA* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1536 195 CDD cysteine_hydrolases 9 178 - -
Pvu10g1536 195 Pfam Isochorismatase family 8 187 IPR000868 -
Pvu10g1536 195 PANTHER OS02G0276400 PROTEIN 1 192 - -
Pvu10g1536 195 Gene3D - 2 195 IPR036380 -
Pvu10g1536 195 SUPERFAMILY Isochorismatase-like hydrolases 4 192 IPR036380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1536 Pvu-Chr10 41874793 41877122 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1536 - - gmx:100499982 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1536 10 41874793 41877122 Pvu10g1536 10 41874793 41877122 ECH