Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1527 ATGGAATCTAGTCGAAGAGCGGTGGAATCGTACTGGCGGTCGCGGTTGATCGATTCAGCTACGTCCGATGAAGATAAAGTCACACCCGTTTACAAATTGGAGGAAATCAGCGAGCTTTTGCGTTCTTCGCATGTTAGTATTGTGAAGGAGATTTCGGAGTTTGTCTTAAAACGTTTGGAACATAAAAGCCCAATTGTGAAGCAGAAGGCTTTAAGATTGATAAAGTATGTGGTTGGGAAGTCTGGTGTGGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCGGTTCGTCAGTTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGCTGATGCACTGAATAAGGCTGTGAGAGACACTGCTCACGAGGCTATCTCTGCCATATTTTCAGAAGAGAATAGTAAGCCAGCACCTGCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATAAAAACTATGAGCCGCCACAGGAAGATAAGAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGCGCGTCAATTAAGCAAGGGATTAATAGCTTAACACAGGGACATTCGCTGATGAAAAATGATCCTGGCAGCTACAGAAGTCCAAATCTTCGAAGATCATTGACCAATGAAGCAGAATATGGTGACAGATATGAGCCAGCTTCGAATCATAATGAAGCTCAGAGTAGTTTTGGAGGCTCAAAGAATCAATCCTCTGGTCCTTGGAATCAGGATTCAAGAGTAACGAAGACGGAAACATCAAATGGAGAATCTGGTGCAAGTTATGTAGAGAGTAAGACAAGAGAGCTTAAGTTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGCCTGCAACCCACTCGAGATGCAATTCAAGCTTTCCTAGCAGAGGCTGCAAAGTTGGATGCACTTCCTTTATGTCATGCCCTTGAACTGAAGCTTCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGAATCCATTCTTAGAAAGAAGGATGATGATCATTTTTCACTGGTGGAATCTTACTTCACTGAAAACCAAGATCTGGTGCTGAGATGTTCTGAATCGCCGCAAGTTTCTTTACGGGAAAGGGCTGTGAAGGTTCTTGGTCTTTTAGGTGGAGGCCAGCCAAACAGCTCTGCAATTAATTCAGAGAATGCTGTGAAAACAGAGAATGCTGCTGTTGTGGAGCTGCCTAACTTGATAGACACTGGTGATTCAGATGATTATCACGGAACTGAGGACACTCTAAAGAGTACAACAGATCAAAATATATCAACTTTGACATCCCCTCCTCTGGTTGATGATTTATTTGGAGATTTCAGCAGCTCTATTGGAGCTAGTCAAGAAATAAAAAATGAGGATGATCCATTTGCTGATGTTTCATTTCACACAAGTGAGAACAAGGACCATGCTGATGATCTCTTTTCTGGGATGACTGTTGGCAATGATAAACAGAGCAATCATGGGAGTCACAGGCAGGGGAATATCAGTGATCCTCAACTTTTTGACATTTTTACTTCCAATTCTGAGCAGGGAAACCATAAGGAGCTTGTTACTGATTTAATGGCCGGCCTATCAATGGAGGAAAATACCTCAAGTACGAAGCACACAGGAACATCTCCTTCCATGCAATCTGAATCTTTATTTTCAGGCTTAACTGACCATATTCCTTCAGATGGCATGTTGAGCTCTCAGCCAACGGGGTTGAATGTAAATCCCATTTTTCCTACTGGTGCTCTGCCTTTTAACATGCAGCCTGGTTTCATGTTGAACCAACCTTATTCTCCCCAGTCTCTTAATTACGGTGCCATGGGAACTCTTTTGGCTCAACAGCAATTCTTAGCAACAATGGCTAATTTCCAACACCTTAATAATATCAATATGCGAGATGACGGTGTTACTCAAATGGCTGGACCCAATGGAAGAACACCTTTGCCAGACATATTTCAACCAAGTTTTCAAACTCAAACTCCTAGCTCAATGATCAACACCTCGAGGAAAGAAGAAACTAAAGCATTTGACTTTATCTCTGACCATATGACCTCTACTCGTGATTCAAGGAGAATGATTTAA 2088 0.4248 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEISELLRSSHVSIVKEISEFVLKRLEHKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKADALNKAVRDTAHEAISAIFSEENSKPAPAEDLNRRIQGFGNKNYEPPQEDKKSFISEVVGIGSASIKQGINSLTQGHSLMKNDPGSYRSPNLRRSLTNEAEYGDRYEPASNHNEAQSSFGGSKNQSSGPWNQDSRVTKTETSNGESGASYVESKTRELKLLETIVTSGGVRLQPTRDAIQAFLAEAAKLDALPLCHALELKLQSPIWQVRMKAVCVLESILRKKDDDHFSLVESYFTENQDLVLRCSESPQVSLRERAVKVLGLLGGGQPNSSAINSENAVKTENAAVVELPNLIDTGDSDDYHGTEDTLKSTTDQNISTLTSPPLVDDLFGDFSSSIGASQEIKNEDDPFADVSFHTSENKDHADDLFSGMTVGNDKQSNHGSHRQGNISDPQLFDIFTSNSEQGNHKELVTDLMAGLSMEENTSSTKHTGTSPSMQSESLFSGLTDHIPSDGMLSSQPTGLNVNPIFPTGALPFNMQPGFMLNQPYSPQSLNYGAMGTLLAQQQFLATMANFQHLNNINMRDDGVTQMAGPNGRTPLPDIFQPSFQTQTPSSMINTSRKEETKAFDFISDHMTSTRDSRRMI* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1527 695 PANTHER UNCHARACTERIZED 1 687 IPR039273 -
Pvu10g1527 695 MobiDBLite consensus disorder prediction 473 503 - -
Pvu10g1527 695 MobiDBLite consensus disorder prediction 534 556 - -
Pvu10g1527 695 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Pvu10g1527 695 Pfam ENTH domain 16 129 IPR013809 -
Pvu10g1527 695 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Pvu10g1527 695 MobiDBLite consensus disorder prediction 484 503 - -
Pvu10g1527 695 SUPERFAMILY ARM repeat 37 382 IPR016024 -
Pvu10g1527 695 MobiDBLite consensus disorder prediction 221 261 - -
Pvu10g1527 695 Gene3D - 2 139 IPR008942 -
Pvu10g1527 695 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Pvu10g1527 695 MobiDBLite consensus disorder prediction 214 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1527 Pvu-Chr10 41817169 41821944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1527 - - gmx:100790466 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1527 10 41817169 41821944 Pvu10g1527 10 41817169 41821944 ECH