Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1522 ATGGTGAGTGAGCAGCAGAGAATAGCAGAGGAGATCCTGCAGGAATCCAAGGTAGCGGCGTTGGAGACCAGTGGCACAATGAGCGGACCCCTCGTCGGAGCCGCCGACAGAACCCGCCGCCGCAGGAGGGTGGAGGCTATGCAACTGCTTCTGAGAGGATTGTGCATGGCCTCCTCTGTTCTTTCAATATCACTCATGGTCACTGCAGAAGAATCAAGCAGTGTCAGTATTTATGGCTTTCAACTTCCTCTTCACTCCAAGTGGTCTTTTTCTGAGTCATTCGAATATCTTGTTGGGGTTTGTGCTGCTGTTGCAGCTCATTCCTTGCTTCAACTACTCATTGGCATATCCAGATTTCTTAAAACCTCTTCTGTGATTCCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGTATTTGCTTATGCATTGATGAGTGCTGGATCTGCTGCATCTGGGGTGACCAATCTGAATCGCACAGGAATTAGACACACGGCTTTACCAAATTTTTGCAAGCCTCTGCACAAGTTTTGTGACCATGTTGGCATCTCAATAGCCTTCACTTTCACCAGCTGCTTTTTGCTGGCTACCTCTGCTGTCCAAGATGTAATATGGCTCTCCCAAAACTGA 636 0.4796 MVSEQQRIAEEILQESKVAALETSGTMSGPLVGAADRTRRRRRVEAMQLLLRGLCMASSVLSISLMVTAEESSSVSIYGFQLPLHSKWSFSESFEYLVGVCAAVAAHSLLQLLIGISRFLKTSSVIPSRNHAWLIFAGDQVFAYALMSAGSAASGVTNLNRTGIRHTALPNFCKPLHKFCDHVGISIAFTFTSCFLLATSAVQDVIWLSQN* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1522 211 PANTHER CASP-LIKE PROTEIN 3A2 6 210 - -
Pvu10g1522 211 Pfam Casparian strip membrane protein domain 42 195 IPR006702 -
Pvu10g1522 211 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 6 210 - -
Pvu10g1522 211 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 49 199 IPR006459 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1522 39 209 Miscellaneous Gene Families AT1G79780 51.744 3.08e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1522 - - pvu:PHAVU_010G146500g 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1522 10 41771997 41774698 Pvu10g1522 10 41771997 41774698 ECH