Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1505 ATGGGGAGCTCTGAAGGGGTGGGGGCATCGTCGAAGCAATGCGGTATCACGAAACCCATTTCGATGGCTGGACCTACGGTTAATGATTTGCAAAGGACTACTGAGTTAGAAAAGTTTCTCGCTGTTTCGGGACTTTATGAGAACAAAGAGGAAGCTGCTAAGAGAGAAGAGGTTCTTCACCGACTTGAACAGATAGTAAAAAACTGGGTGAAGCAACTTACTCGCCTAAGGGGATACACTGATCAAATGGTGGAAGATGCAAATGCTATCATCTTGACTTTTGGTTCTTTTCGGCTTGGTGTTCATGGTCCTGGGGCTGACTTAGACACAATATGCATCGGACCTTCCTACGTGAATCGGGAGGAGGATTTTTTCTACACACTGCATGATATCCTTGCCAACATGGAGGAGGTCTCGGAATTGCAACCAATTCCGGATGCTCATGTCCCTGTCATGAAATTCAAGTTTGATGGAATATCAATTGACCTCCTTTATGCCAGTATTTCTCACTTGATTGTACCTGAAGACTTGGTTATATCTGATGTCTCTCTTCTACACAATGTTGACGAGCCTACTGTGCGAAGTTTGAATGGCTGCAGAGTTGCAGATCAAATTCTAAAGCTTGTTCCTAATGTTGAGCACTTTCGCACCACACTTCGCTGCTTGAAATTTTGGGCCAAAAGGCGAGGCATTTATTCCAATGTGACGGGTTTTCTTGGTGGTGTTAACTTGGCACTTCTTGTAGCTCGAGTATGCCAGTTGTATCCAAATGCAGTTCCAAGCATGCTTGTTTCTCGATTCTTTAGGGTATATACACAGTGGAGGTGGCCAACTCCTGTCATGCTATGTCCAATAGAGGAGAATGAACTTGGTTTTTCTGTTTGGCATCCTCGTAAAAATCCTCGTGACCGATCCCATCTTATGCCAATTATTACTCCCGCCTATCCCTGTATGAATTCTAGTTATAATGTTTCTACAAGCACACTTCGTGTTATGATGGAGCAATTCCAATTTGGCAACAAGATATGTGGGGATGTAGAACTGAACAAAGGTTGTTGGAAAGATATGTTTGAACCATACGGTTTTTTTGAAAGTTATACAAACTATTTGCAAGTTGATGTAGTTGCTGCTGATGTCGATGACTTGCGCAATTGGAAGGGTTGGGTGGGATCACGCCTTCGGCAGTTGACCTTGATGATTGAGCGTGACACTTTTGGGAAGTTGCAGTGCCATCCCTATCACCACGAGTATATCGATACCTCGAGGCAGAGTGCACATTGCGCTTTCTTTGTGGGTTTGCAGAGGAAGCAGGGAGAAGTAGTTCAAGAAGGCCAACAGTTTGATATACGAGGAACAATTGAAGAATTTTTGCATGCGGTTAATATGTACATGTTCTGGAAACCAGAGATGGAGATTTTTGTTTCTCATGTTCGTAGAAGGCAAATTCCATGCTATGTGTTTCCTGATGGTTATAAAAGATTGCGACCATCAAGGCCAACATCAAAAGAGAATCATAAATCATCTTGTAAAAATGAAGTTTCTGGGACTGAGGTGCGTAAGAGGAAGAACAATGATGGGTTGGGTGTGAGGGAGGATGCTACACTAAAAAAGCAATGTACTAGTCCTCCTGAAGGTAGATGGGCAAGTCGCAGTGGCCTTGGTACTGGTGCTGTGTCTGATAGTCAACAGTTGAGAAATGTGGAGTGCAATCATTTGTCAAACAGTGGGCAAGAGTTGAGTAGAACGGAGTCTCCTGAACCCGCCTCTAATTCTAGTGGGATTGCTTCGGTTACAAGTGATAGTGGTTCTTCTGAAGACACTGGAGCTGTATCTGTGGCAGGTTGTGTTGAAGATAGCACCGGGGGTGTTGATATGAACAACAATGGCAGGTTTGAGAGTAGTACATACGTGAACGGTTCTGTCCAACTGGTGAAAACAGAATAA 1944 0.4378 MGSSEGVGASSKQCGITKPISMAGPTVNDLQRTTELEKFLAVSGLYENKEEAAKREEVLHRLEQIVKNWVKQLTRLRGYTDQMVEDANAIILTFGSFRLGVHGPGADLDTICIGPSYVNREEDFFYTLHDILANMEEVSELQPIPDAHVPVMKFKFDGISIDLLYASISHLIVPEDLVISDVSLLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFSVWHPRKNPRDRSHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICGDVELNKGCWKDMFEPYGFFESYTNYLQVDVVAADVDDLRNWKGWVGSRLRQLTLMIERDTFGKLQCHPYHHEYIDTSRQSAHCAFFVGLQRKQGEVVQEGQQFDIRGTIEEFLHAVNMYMFWKPEMEIFVSHVRRRQIPCYVFPDGYKRLRPSRPTSKENHKSSCKNEVSGTEVRKRKNNDGLGVREDATLKKQCTSPPEGRWASRSGLGTGAVSDSQQLRNVECNHLSNSGQELSRTESPEPASNSSGIASVTSDSGSSEDTGAVSVAGCVEDSTGGVDMNNNGRFESSTYVNGSVQLVKTE* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1505 647 MobiDBLite consensus disorder prediction 573 647 - -
Pvu10g1505 647 CDD NT_PAP_TUTase 54 209 - -
Pvu10g1505 647 Gene3D Beta Polymerase, domain 2 47 203 IPR043519 -
Pvu10g1505 647 SUPERFAMILY PAP/OAS1 substrate-binding domain 210 359 - -
Pvu10g1505 647 Gene3D - 15 357 - -
Pvu10g1505 647 Gene3D Poly(A) polymerase predicted RNA binding domain 361 477 - -
Pvu10g1505 647 Pfam Nucleotidyltransferase domain 88 163 IPR002934 GO:0016779
Pvu10g1505 647 Pfam Poly(A) polymerase predicted RNA binding domain 362 420 IPR007010 GO:0003723|GO:0043631
Pvu10g1505 647 Pfam Poly(A) polymerase central domain 15 359 IPR007012 GO:0004652|GO:0043631
Pvu10g1505 647 MobiDBLite consensus disorder prediction 495 559 - -
Pvu10g1505 647 MobiDBLite consensus disorder prediction 495 532 - -
Pvu10g1505 647 PANTHER POLY A POLYMERASE 3 569 - -
Pvu10g1505 647 MobiDBLite consensus disorder prediction 621 647 - -
Pvu10g1505 647 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 361 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Pvu10g1505 647 SUPERFAMILY Nucleotidyltransferase 15 208 IPR043519 -
Pvu10g1505 647 PANTHER NUCLEAR POLY(A) POLYMERASE 4 3 569 - -
Pvu10g1505 647 PIRSF PolyA_polymerase 3 611 IPR014492 GO:0004652|GO:0005634|GO:0043631
Pvu10g1505 647 MobiDBLite consensus disorder prediction 573 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1505 Pvu-Chr10 41610092 41614674 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1505 K14376 - gmx:100783237 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1505 10 41610092 41614674 Pvu10g1505 10 41610092 41614674 ECH