LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu10g1489	ATGGCCAGTATTCTAGGTCCTTCTTTAGGCATAGTCACAGCCTCTGCATCAAGAAATGAGCCACAAGTTCTGTCTAAAATCACTGCAGTGAGAGGAAACTCTCATTCACCACTGTGGTTTTCTTGCACTCATCCTAATAGAAAAGCCGCTCGAAACCATTTTCAGCTCAAATCCTCAAATGGGCTTCCGCTGAATGCTGTTTCTTCTAATGATGGTTTAGCTGGGACTTCATTGGCTAAAGAAGATAGCAAGCCCCAACCACTTCATGGACTATTCCCATTGTCAGAGCCAGAATGTACAGGATCCAATATTAGTATAACTGTTGTTGGAGCTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCAGCACTCTTTGCTCTCTTTTATGAAGATTGGCTACCTGAGAATTTTCTTGTTTTTGGATTTGCTCGGACTAAAATGACCAATGAAGAATTAAGGAACATGATTAGCAAAACTTTAACATGCAGAATTGACAAAAGAGAAAATTGTGAAGATAAAATGGACCAGTTCTTAAAAAGATGCTTTTACCATTCTGGTCAATATAATTCTGAGGAGCACTTTTCAGAGTTGGATATCAAGCTCAAAGAGAAAGAGGGTGGAAAATTATCGAACAGATTGTTTTATTTGTCAATACCTCCAAACATATTTGTGGATGCGGTGAGATGCGCTAGCCAAAAGGCTTCTTCCAAAGATGGGTGGACAAGGGTTATTGTTGAAAAGCCATTTGGTCGTGACTCAGAATCATCAAGTGATCTAACAAAATGTTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATTGACCATTACTTGGGTAAGGAGCTTGTGGAGAATCTATCAGTGCTTCGCTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGAATTACATTCGCAATGTGCAGATAATATTTTCTGAAGATTTTGGAACTGAAGGAAGAGGGGGTTATTTTGATCACTACGGAATCATTCGTGATATAATGCAAAATCATCTTCTGCAAATACTAGCTTTGTTTGCAATGGAAACACCAGTCAGCTTAGCTGCTGAGGACATCAGGAATGAAAAGGTGAAGGTTCTGAGATCAATGAGACCACTGCAGCTTGAAAATGTTGTTGTTGGTCAATATAAGGGCCACAACAAGGGTGGAAAATCATATCCCGCTTATACAGATGATCCAACTGTTCCTAAGGGTAGTCTTACTCCAACTTTTGCAGCAGCAGCTCTTTTTATAGACAATGCCAGATGGGATGGGGTTCCTTTTCTCATGAAAGCTGGCAAGGCTCTCCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACACGTCCCAGGTAACTTGTACAAGAGGAATTTTGGAACTGATCTAGACAAGGCCACAAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAAATCAACAATAAAGTGCCAGGTCTGGGAATGAGATTAGACAGAAGTGACCTGAATTTGCTTTTCCGAGCAAGGTATCCAAGTGAAATACCAGATGCATATGAGAGGTTACTCCTAGATGCCATTGAAGGCGAGCGAAGGCTGTTCATTAGAAGCGATGAGCTTGATGCAGCTTGGGCATTATTCACTCCTTTGCTAAAAGAAATTGAAAACAAGAAGATTGTTCCAGAGCTCTACCCCTATGGTAGCAGAGGACCGGTTGGAGCACATTACCTTGCTGCAAGGCACAATGTTAGATGGGGAGATCTTGGTAATGAAGACTGA	1773	0.4095	MASILGPSLGIVTASASRNEPQVLSKITAVRGNSHSPLWFSCTHPNRKAARNHFQLKSSNGLPLNAVSSNDGLAGTSLAKEDSKPQPLHGLFPLSEPECTGSNISITVVGASGDLAKKKIFPALFALFYEDWLPENFLVFGFARTKMTNEELRNMISKTLTCRIDKRENCEDKMDQFLKRCFYHSGQYNSEEHFSELDIKLKEKEGGKLSNRLFYLSIPPNIFVDAVRCASQKASSKDGWTRVIVEKPFGRDSESSSDLTKCLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQIIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLAAEDIRNEKVKVLRSMRPLQLENVVVGQYKGHNKGGKSYPAYTDDPTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLFRARYPSEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKKIVPELYPYGSRGPVGAHYLAARHNVRWGDLGNED*	591

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu10g1489	590	PRINTS	Glucose-6-phosphate dehydrogenase signature	242	255	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	PRINTS	Glucose-6-phosphate dehydrogenase signature	266	294	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	PRINTS	Glucose-6-phosphate dehydrogenase signature	318	335	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	PRINTS	Glucose-6-phosphate dehydrogenase signature	336	352	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	PRINTS	Glucose-6-phosphate dehydrogenase signature	423	449	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	PANTHER	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC	98	589	-	-
	Pvu10g1489	590	TIGRFAM	zwf: glucose-6-phosphate dehydrogenase	104	584	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	Pfam	Glucose-6-phosphate dehydrogenase, NAD binding domain	108	286	IPR022674	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	PANTHER	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD	98	589	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	SUPERFAMILY	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	276	583	-	-
	Pvu10g1489	590	ProSitePatterns	Glucose-6-phosphate dehydrogenase active site.	276	282	IPR019796	GO:0004345\|GO:0006006
	Pvu10g1489	590	Gene3D	Dihydrodipicolinate Reductase; domain 2	275	584	-	-
	Pvu10g1489	590	Gene3D	-	100	274	-	-
	Pvu10g1489	590	Hamap	Glucose-6-phosphate 1-dehydrogenase [zwf].	103	585	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Pvu10g1489	590	Pfam	Glucose-6-phosphate dehydrogenase, C-terminal domain	289	583	IPR022675	GO:0004345\|GO:0006006\|GO:0050661
	Pvu10g1489	590	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	100	289	IPR036291	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu10g1489	Pvu-Chr10	41502858	41507474	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu10g1489	K00036		-	gmx:100780018	1093.95