Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1479 ATGGGTAGCTCGGGGAAGTCGAACGTGAACGGAATCGATGCGTCGGTGGGTGGGTTGGTTTGGGTTCGACGAAGAAACGGGTCGTGGTGGCCGGGTCGGATATTGGGTCTTCACGAATTGTCGGAGAGTTGCTTGGTTTCTCCGAGATCGGGTACTCCCGTCAAGCTCTTAGGTCGTGAGGATGCAAGCGTGGATTGGTATAATCTTGAAAAATCAAAGCGGGTAAAAGCTTTTCGCTGTGGAGAGTATGATGAATGCATTGAGAAGGCAAAGGCATCAGCTGCTAATTCAAACAAGAAGGCAGTGAAGTATGCTCGCAGGGAAGATGCCATTCTTCATGCTCTTGAGCTAGAGAGTGCTCACCTGGACAAAGAATCGTTAAGCTTATGCTCTGGATTAGATAAACCTGGTAGTGAACATGGAGGATCAGCTGGGGAATTACCACTCATGTCTAATTCTGAAGATGTGACTGGTGATCTGAGTGACTCTGATGACAATTCTAATTCAGCCCCAGAATTGTCACAATCTGTTATATCTTTTGAAGTGCCTAATCACAATGGTTCTTTAAAGTTGCATTCTGTGCAAGGAAGGAGGAGAAGAACACCTAATGATTCAGAAGATGATGGATCTGAAGGAGTCAAACGAATGAGAGGACTTGAGGACTTGGGCATTGGTGTAGTGTCAAAGAAAAAGGTCCAAGGTACAGGTGCAACTGAAATTGGTCTGCACATTAGTGCTTCACTCAACAATTCTACCACGGGGAACTGCCTGGCAAATGGAACATCTGTAAATGGTGGTAAAGGTTATTCTTCAACATTGAAAAGGAAGAGATCACAAGTGGCAAATGTTCATGAGTTATTGAAAAGGAAAAATCGACGCAGGCCCTTGACTAAAGTTTTGAAGAGTACAGCCATGGTGTCAGTTCCTGTCATTTGTGATCATCTTCCCATTTCAAACAGTTCTCCACTATGCGGGGTAACTGATGGAAGAAGTTCTGGACTAGATTCTAATGATTCAAAGAAAACTTTTCCAATGTCAACACGTAATTCAGATAGTACTGAAGCTGGTTGTTGTGAGAATGGGACTTCATTAATTGTTCATGACCATGGTAGTGGAGATGATGGCTCACAAATCAATCATGGGGTCAAGGAGAATGAAGCTTCTGGCCAAGCAGGGCTAGTTGGCAAAGATTCTCCTGATAAACTATTTGATGTGCCGTTTGTTGGGGTTCTTGGGGAGGTGAAACACACTCCTGATTTGTCACCCATTTTGGTTTCTTGTTCACCTGACAAACCTCAAGTTAGTGCATTGGGACAACAATCTTGTAATCTTAGTCCATGTGAAGCTGTGTCATTGAGAGATGAGATCAAGAACGAACCTGGTTGTACCAGTTCTGCTACTGGTCACAATATTGTGGGCCATAGACAAGACAAAGGTAGTTCAAAGTGGCAGTCAAAAGGAAAGAGGAATTCAAGACATACAAGTAAAAATATAAAACATGTCTCAAGAAAATATGTGGACACAGGCCACCAATCCAGTGCTTCTTTGCCAGTAATAGGAAGTTCAGATGGAACCTACCAGGGTGCCGGCTCGAAAGTTGATTGGAATGGCATGGGTGCACCTTACACTTCGTACAACTGTAATTCTCAAGTTAAATGCAAACCTGTTGCGGAAGGCCAACTAGAAGGATTTCGGGACTTGAACAAGCATATCAAGGGCACAACAACGGAGGCAAAGGCATTACCTGATGGATCTCTCATACCTCAAAGATTACTTCCTTATCGCCATTCGCGCTTCACTGTCAACTCCAGATATCAAATGGCAGATTTCCCTGGAAGAAACTATTGTTCTGAGGCTTCATTATATGATGTTAAGCTAGAAGTTAAATCCAGCTACCGGCCGCAACACGTGCCTTTGGTTTCTCTTGTGAGTAAACTGAATGGCAAAGCTTTTATAGGGCACCCTTTGACAGTTGAGGTTTTGGAAGAGGGTCATTGTGATAAAATGTTGAGTGGCAGTGGATGTGACATGGAAGCTGGTGATGTCTTTTGCATGGCCAAGCCAAACTTGGTACCCAGAAGAATACATTCCAAAAGTTCAAAACGTTTGAAATCTTCCAAGATGAAAAAAACAGGGCTGATGAATAAAAAGATTCGGAAATTGTCTTCATTGACAGGTCACAGACAGTCAGAAGAGGAGAGAAAACCAGTGGTAGATAAGCTGAAGGGTCCTGTCATAGCTTGCATTCCCCTTAAAGTAGTGTTCAGTAGGATAAATGAAGCAGTGAGTGGTCAAGCTCGGTCAACACACCGGGCAGTACCAACATCATCCACCAATCCATGA 2343 0.4362 MGSSGKSNVNGIDASVGGLVWVRRRNGSWWPGRILGLHELSESCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDAILHALELESAHLDKESLSLCSGLDKPGSEHGGSAGELPLMSNSEDVTGDLSDSDDNSNSAPELSQSVISFEVPNHNGSLKLHSVQGRRRRTPNDSEDDGSEGVKRMRGLEDLGIGVVSKKKVQGTGATEIGLHISASLNNSTTGNCLANGTSVNGGKGYSSTLKRKRSQVANVHELLKRKNRRRPLTKVLKSTAMVSVPVICDHLPISNSSPLCGVTDGRSSGLDSNDSKKTFPMSTRNSDSTEAGCCENGTSLIVHDHGSGDDGSQINHGVKENEASGQAGLVGKDSPDKLFDVPFVGVLGEVKHTPDLSPILVSCSPDKPQVSALGQQSCNLSPCEAVSLRDEIKNEPGCTSSATGHNIVGHRQDKGSSKWQSKGKRNSRHTSKNIKHVSRKYVDTGHQSSASLPVIGSSDGTYQGAGSKVDWNGMGAPYTSYNCNSQVKCKPVAEGQLEGFRDLNKHIKGTTTEAKALPDGSLIPQRLLPYRHSRFTVNSRYQMADFPGRNYCSEASLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFIGHPLTVEVLEEGHCDKMLSGSGCDMEAGDVFCMAKPNLVPRRIHSKSSKRLKSSKMKKTGLMNKKIRKLSSLTGHRQSEEERKPVVDKLKGPVIACIPLKVVFSRINEAVSGQARSTHRAVPTSSTNP* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1479 780 MobiDBLite consensus disorder prediction 460 519 - -
Pvu10g1479 780 MobiDBLite consensus disorder prediction 485 499 - -
Pvu10g1479 780 MobiDBLite consensus disorder prediction 133 216 - -
Pvu10g1479 780 MobiDBLite consensus disorder prediction 154 191 - -
Pvu10g1479 780 Gene3D - 5 119 - -
Pvu10g1479 780 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Pvu10g1479 780 SUPERFAMILY Tudor/PWWP/MBT 14 118 - -
Pvu10g1479 780 MobiDBLite consensus disorder prediction 197 216 - -
Pvu10g1479 780 Pfam PWWP domain 18 107 IPR000313 -
Pvu10g1479 780 PANTHER T17B22.17 PROTEIN-RELATED 1 774 IPR044679 -
Pvu10g1479 780 MobiDBLite consensus disorder prediction 328 354 - -
Pvu10g1479 780 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 1 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1479 Pvu-Chr10 41430732 41435657 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1479 - - gmx:100791879 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1479 10 41430732 41435657 Pvu10g1479 10 41430732 41435657 ECH