Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu10g1478 | ATGACGGACTTCAAACAAGAACAAGATATGGAGATTGAAGCATTAGAAGCCATACTTATGGATGAATTCAAAGAAATACACTCTGGTGAAAGTGGCTTAAGTACTTCCAATCGGTGCTTCCAAATAAAGGTTGTTGCGCAGGATGACGATACTGATGGGCCAATAACTAATCCAGCTCAACTGGCTTTGATCTTTTCACACACAGAAAGATATCCCGATGAACCGCCCCTTTTAAATTTGAAAAGTTTGCAAGGAATACATACTGAAGATCTAAGGATTTTGAAAGAAAAACTTCTACAAGAGGCATCTGAAAATCTTGGTATGGCTATGATATATACACTTGTTACCTCAGCAAAAGAATGGCTGTCTGACCGGTTTTGTCAAGACTCTGTTGATGAGAGTGCTGAAGCAGAAGAGGCAGCCAAAGATGATATAGTGATACCTCACGGAGAACCAGTTACTGTTGAAACATTTTTGGCATGGAGAGAAAGGTTTGAAGCAGAACTAGCATTGGAACGAGCCAAGCTAATGCCCGAATCTGTGCTCACAGCTCCTAAGGAAAAGAAGCTTGGTGGTAGACAATGGTTTGAAAGTGGAAGAGCGAAAGGTGTGGCTGCTGCTGTCAACGAGGAATCTGATGTGGAGGATGAGGAAGACATTGACTTTGATGAAGATGATTTTGAAGATGACGAAGAGGAGGATATGCTTGAGCATTATCTGGCTGAAAAAACTGATTCTTCCAGCAGAGCTAGTTAA | 756 | 0.414 | MTDFKQEQDMEIEALEAILMDEFKEIHSGESGLSTSNRCFQIKVVAQDDDTDGPITNPAQLALIFSHTERYPDEPPLLNLKSLQGIHTEDLRILKEKLLQEASENLGMAMIYTLVTSAKEWLSDRFCQDSVDESAEAEEAAKDDIVIPHGEPVTVETFLAWRERFEAELALERAKLMPESVLTAPKEKKLGGRQWFESGRAKGVAAAVNEESDVEDEEDIDFDEDDFEDDEEEDMLEHYLAEKTDSSSRAS* | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu10g1478 | 251 | MobiDBLite | consensus disorder prediction | 203 | 251 | - | - | |
| Pvu10g1478 | 251 | PANTHER | RWD DOMAIN-CONTAINING PROTEIN | 1 | 246 | IPR040213 | - | |
| Pvu10g1478 | 251 | Gene3D | Ubiquitin Conjugating Enzyme | 1 | 128 | IPR016135 | - | |
| Pvu10g1478 | 251 | MobiDBLite | consensus disorder prediction | 210 | 236 | - | - | |
| Pvu10g1478 | 251 | Pfam | RWD domain | 6 | 122 | IPR006575 | GO:0005515 | |
| Pvu10g1478 | 251 | ProSiteProfiles | RWD domain profile. | 10 | 125 | IPR006575 | GO:0005515 | |
| Pvu10g1478 | 251 | PANTHER | BNAA05G15340D PROTEIN | 1 | 246 | - | - | |
| Pvu10g1478 | 251 | SUPERFAMILY | UBC-like | 1 | 124 | IPR016135 | - | |
| Pvu10g1478 | 251 | SMART | RWD2001b | 10 | 125 | IPR006575 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu10g1478 | - | - | gmx:100788547 | 380.563 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu10g1478 | 10 | 41418624 | 41424154 | Pvu10g1478 | 10 | 41418624 | 41424154 | ECH |