Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1476 ATGTTGTTGCCAACCAGTGGAGTAGTAGGGATGAATTCTGTAATGGATGATATGACTTTGATTCAGCAGAGCCAGAGGCATAGTTTGGTTGTGAGAGAGCTTGGTGAGGAGATTGATTTAGAAATTGGACCTGGGGATGATGACCCTTCATTTGGTAACGCTACTCTAATTGGTGCACCAATGCGGGAATCTTCCGCTGAAGAACATGGTGAGAGCAAGCAAATGGGGATGGTTTCTCAGCTTTCTAATGATGCTCAAGACATGTCCAAAAACCAACAGGTGAAAAGGAAGAAAAAGGTTGTTAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTTTGTAGATATGAAGGATGGGACACCTAGGATTTTCTGCTCTGTCTGCAGGGAGTATGGACGGAAGCATAGAAGAAATCCTTATGGGAATGAGGGCAGTCGTAATATGCAAATGAGTGCTCTTGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTTGACAAGCCTGTTTATGTAAAAGCAGGATCAATACTTGAAGCTACACTAAAAAGGGATCCTCATGAGGTAGAATTCATTCAGGCAGTCCAGGAGGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAATTCTCGTTATGTTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTTCGAGTTTCGTGGGTGGATGATAGGGGTGAGACACATGTAAATCGGGGCTTTAGGGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTATTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCGCCATATAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGAGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGCTACCTAGGGCCTGACAAGGACCTTCCATCAGAGGAAATGGGCGTTGGTACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCCAGGATATTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGACTGATCATATGTACCCAGCTTGTTACAAATGTAATCAATCCTAGGTCCTC 1232 0.4253 MLLPTSGVVGMNSVMDDMTLIQQSQRHSLVVRELGEEIDLEIGPGDDDPSFGNATLIGAPMRESSAEEHGESKQMGMVSQLSNDAQDMSKNQQVKRKKKVVKRWREEWADTYKWAFVDMKDGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPVYVKAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERMIVFRVSWVDDRGETHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLIICTQLVTNVINPRS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1476 410 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 237 364 IPR006097 GO:0006520|GO:0016491
Pvu10g1476 410 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 7 404 - -
Pvu10g1476 410 Gene3D Leucine Dehydrogenase, chain A, domain 1 237 370 - -
Pvu10g1476 410 PANTHER BNAA06G02140D PROTEIN 7 404 - -
Pvu10g1476 410 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 294 308 IPR006095 GO:0006520|GO:0016491
Pvu10g1476 410 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 395 IPR006095 GO:0006520|GO:0016491
Pvu10g1476 410 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 191 376 IPR046346 -
Pvu10g1476 410 Gene3D Glutamate Dehydrogenase, chain A, domain 3 183 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1476 Pvu-Chr10 41405548 41410338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1476 213 400 EF-hand Containing Proteins AT5G07440 31.250 1.15e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1476 K00262 - gmx:100788009 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1476 10 41405548 41410338 Pvu10g1476 10 41405548 41410338 ECH