Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1475 ATGTTGTTGCCAATAAGTGGAGTAATAGGGATGAATTCTTCAATGGAGGATATGACTTTGATTCAGCAAAGCCAGCGACAACATCACTTGGTTGTGAGAGAGCTTGGTGAGGAGATTGATTTGGAAATTGGACCTGGGGAGGATGACCCTTCATTTGGTAATGCTGCTCTAATTAGTGCACCAATGCGGGAATCCTCTGCAGAAGAACATGGTGAGAGCAAGCAGATGGTCATGGTTTCTCAAATTCGTAATGATTCTCAAGATATGTCCAAGAACCAACAGGTGAAAAGGAAGAAAAAGGTTGTCAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTATGTTGATGTGAAGGAAGGGACACCTAGGATTTTCTGCTCTGTCTGCAGGGAGTATGGCCGGAAGCATAGAAGAAATCCTTATGGGAATGAGGGTAGCCGAAACATGCAGATGAGTGCCCTGGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTTGACAAGCCTATTTATGTAAAAGTTGCCATGTCAAAAACGGCTGGATCAATTCTTGAAGCTACTCTGAAAAGGGACCCTCATGAGGTTGAATTTATTCAGGCAGTCCAGGAGGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAGAACTCTCGTTATGTTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTATTTTTAGGGTTTCGTGGGTGGATGATAGGGGTGTGACACATGTAAATCGGGGCTTTAGGGTACAATATAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCACCCATCAATGAATTTAAGTGTTGCTAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCACCATACAAATTGGGAGGAGCAGCTGGTGGGAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGCTACCTGGGGCCTGACAAGGACCTTCCATCCGAAGAAATGGGTGTTGGTACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGAATATTTTGGTCTGGTTCCAGTCTTCGACCTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTCATGCTTGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTTGTGAGCGGCTCTGGAAAGATTGCAATGCATGTTTTGGAGAAGCTAATTGCTTATGGTGCTCTCCCCATTTCAGTATCAGATTCCAGAGGATATTTGGTTGATGAGGATGGATTTGACTACATGAAAATATCATTTTTGAGAGACATCAAAGCTCAGCAAAGAAGCTTGCGAGACTATTCAAAAACCTATGCTCGGTCCAAATATTATGATGAAGCAAAGCCGTGGAATGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACAGAATGAAATTAATCAATCTGATGCCATTAATTTGGTCAATTCAGGTTGTCGTATACTAGTTGAAGGTTCAAACATGCCTTGTACCCCTGAGGCAGTTCAGATTTTGAGGAAGGCTAGTATTCTCGTTGCTCCTGCAATGACTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCACCAGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAGCAGACTTATCAGAGAGCTATCAAAGCTGCAACTGATTTTGGTTATCAAAAGGAAAGTCCTGAGGCTCTGGTGCATGGAGCAGTCATATCTGCCTTTCTAACCATTTCTCAAGCCATGACTGATCAAGGCTCTGTATAG 1920 0.4276 MLLPISGVIGMNSSMEDMTLIQQSQRQHHLVVRELGEEIDLEIGPGEDDPSFGNAALISAPMRESSAEEHGESKQMVMVSQIRNDSQDMSKNQQVKRKKKVVKRWREEWADTYKWAYVDVKEGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPIYVKVAMSKTAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERMIIFRVSWVDDRGVTHVNRGFRVQYNQSMGPCRGGIRFHPSMNLSVAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFACASQNEINQSDAINLVNSGCRILVEGSNMPCTPEAVQILRKASILVAPAMTAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTISQAMTDQGSV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1475 639 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 390 637 IPR036291 -
Pvu10g1475 639 SMART ELFV_dehydrog_3 391 637 IPR006096 GO:0006520|GO:0016491
Pvu10g1475 639 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 244 371 IPR006097 GO:0006520|GO:0016491
Pvu10g1475 639 Gene3D Glutamate Dehydrogenase, chain A, domain 3 568 639 - -
Pvu10g1475 639 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 198 383 IPR046346 -
Pvu10g1475 639 Gene3D - 396 561 - -
Pvu10g1475 639 CDD NAD_bind_2_Glu_DH 382 637 IPR033922 GO:0016639
Pvu10g1475 639 Gene3D Glutamate Dehydrogenase, chain A, domain 3 198 241 - -
Pvu10g1475 639 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 7 639 - -
Pvu10g1475 639 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 390 637 IPR006096 GO:0006520|GO:0016491
Pvu10g1475 639 Gene3D Leucine Dehydrogenase, chain A, domain 1 242 377 - -
Pvu10g1475 639 PANTHER BNAA06G02140D PROTEIN 7 639 - -
Pvu10g1475 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 301 315 IPR006095 GO:0006520|GO:0016491
Pvu10g1475 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 380 402 IPR006095 GO:0006520|GO:0016491
Pvu10g1475 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 422 442 IPR006095 GO:0006520|GO:0016491
Pvu10g1475 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 559 570 IPR006095 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1475 Pvu-Chr10 41391321 41401683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1475 220 517 EF-hand Containing Proteins AT5G07440 30.464 3.02e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1475 K00262 - gmx:100788009 1192.18