Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1474 ATGTACGGCGGCGCCTCCTCTAAGCTCGGCCGCGGCGCCCCCAACCGCCGCTCCTTCCCTCCTCCTCCGGCGCCTCACCGTTCATCCGCTCCCGGAGGCCGCCTCTCCCTCGGCGCCTCCTCCCGCAACGCCGCGAAGGAGGTGGCGGCGACGGCAGCGGTGGAGGAGACCTTCAGCCTGATCTCCGGCAGCAATTCGCTTGCATTCTCGATGATCATACGGCTCGCGCCCGACCTCGTGGAGGAGATCAGGCGCGTGGAGTCACAGGGCGGCACTGCGCGTATGAAGTTCGGCCCCAATCCTCACAATCCAAGCGGAAACATTATAGATGTTGGTGGGAAGGAGTTCAGGTTTACGTGGTCAAGGGAATTGGGGGACCTCTGTGATATTTATGAAGAGCGTAAGAGTGGCGAAGATGGTAATGGTTTGCTTGTTGAATCTGGGTGTGCCTGGCGCAAACTGAATGTGCAGCGTATCTTGGATGAGTCCACCAAAAATCATGTCAAAAGGCGGTCAGAGGAAGCTGATCGGAAAATGAAGTCTCGCAAAGCCATTGTCTTAGAGCCTGGGAACCCGCCTATGAAAAGTCAGATAAAGGCATTAGCAGCTGTTGAGGCTACAACATGGAAAAATTACAGTAAGAAGAAAGAGGCTGCACTTAAAAAAAGGAAAGTGGAAACCATTCAAGCTGGTGGACCCCCAAAATCTTCCCATAGATCTGGGTTGACTTCAACAAGTACAAGTACCAAGGGCAGACATTCCTCTCCTCAACCGTCTCCACCAGATCCTTTTGCTGCTTCTTCCTCTCCACTAGGAGTTGTAAATATGTCTAAGACCTCTGAGGATGCTGTGCCTGCACAGATGACAGGTAAACAAGATACTAATGTTGTCTCTGAGAAAGAAACTTCTACCAGGACAAACAAAGCTGTGAGGAACACACCAGGTGGCAAGGGGCCTCATGGGTCTAAACCAGCAGATTTGCAGGGCATGTTAATTTCTATTCTAAAGGATAAACCTAGTGGAATGACTTTGAAGGCTTTGGAGAAAGCCGTAGGAGACACACTTCCAAATTCCATAAAGAAAATTGAGCCAATTATAAAAAAGATTGCAAAATATCAGGCTCCAGGAAGGTATATATTGAAACCAGAAGTGGATTTGGAAAGCTTAAATAAGCCTCAGATTGAAAGCGGAAGTTCTCCTGATGACAATCACAGCCAGATACCTACTCGTGAAGAGTTTCATGACCAGACATCAGCCCCACAGGGAGAATCTGAAGAAAAAGTCCCAAATGTTGATATGGAGGAAATGGTTAATGTAAAATCCAAAGTAGAAGAAGATACAAACAATTTGGAAAAAATTGATGCCCAACATACTTCACCTGATATCCTTGGTGACAAAAAAGGTTCTGATTACAGTGAAGGCCAGGCAGGCAGCTCCAGTGATAGCGGAAGCGACAGTGACAGTGACAGTGACAGCAGCGATAGTGGCAGTGACAGTGGAAGCCACAGTAGGAGCAGAAGTAATGCGGGATCAGGGAGCGGGAGTAGTAGTGACAGTGAAAGTGATGCATCTTCTAGCAGCAAGGAGGGACTGGAGGGTTCTGATGAGGATGTAGATATTATGACTAGTGATGATGAGAAAGAGTCAAAGCAAAAAGCTGAAGTATCTGATCAAAGGATGCCCTTACCCATTCAAGGAAAATCTCCTGATGGAAGATCAATGCAGAACGAGGTTGATGAGAAACAGGATGGTAATGAATCTGATGCAATTGAAATTGAAAAGGACTTACCTGAGGAACGGGAAACTGAATTGGCTCTACCTCCAGCTACCATTCCAAATAGAGGTGGAAAATATGCAGAAGAGACGAGACCCGTTTCAATTGACTATCAACAGGTCCAGGAAGGCCAAAATTATACAGGAAGTTTGTTTGATGAAAAAGAAAGTGAAGTTAAAGATAGGTCTAGGCATGAACAGTCTGACAGCTCGGATAGGTTCTCTAAAGGTAAACATAAGAGGGTTTCTGATGTGAAGAGTGTAGATGAGAAAACAGAACGTGCAAAGAGGTTAAAAGCAGAATTGTCTCCTGGTATTGATGTGCAGACATTAAAAAATTCTCGGAACTTGTCTCCTTCTGAATTTACTGAAGACACTGGTAAGGGACCTAATGTACAAGTGTTGAACAGAGCTGATAGGCAAGCGAATTTAAGTGTTGGCTTACAAAAAGGACCCAATCGAGCATTTCCTGGAAAATCTAGTTCAGATTTTCCACAAAAGTCCTCATCTCAAACCCATTGGGAAAACCCTTCCTACTCCTGGGAAAAATCAGATAAACAAGGAGAAAGTGTAAGGCACAGCAAAAAACACTCAGCAAATGACTTCCCTGCACGAGAAGCTTCTTCCGTACAGAAAGATAAATCTCATAAAGATGCATCAAATGAAGATATCAGTGCCACTGAGAAAAAAGTTTCAAGGAATTCCAGGGATGGTAGTAATGGAAGTAAACAGCCTCTATTCATGGATTCTTATTACCAAGAACAAGGTGAAATGGTTGGTAAATCAAGAGAACACCGGCAAAGTACACAGTCACACTTGGGAATATCACCTAAGGAAAGCGACAGAATTGGTCTTGATCAATCCCCTGTAACTAATGGACGAGGTGTCTCTCTTCAAAGAGAGCTTTCAGACTTGGAGTTGGGAGAACTTCGTGAGTCCACTCCAGATGAAACTCATGTTGCAAAGCAATTTGAACGAAAAGGTTCTTTTAAACAGTTGGAAAACAAAACAAACAACACTTCAGAGGACAGGAATTCAGATATTACTAGAGTAAAACCATCATTGAAGGCAAATTCAGATTCAGGAAAACAGTCCTCAGCCTTTGTAAATTCTGGTTTACCCAGTAATTTGGACAACACATACAAAAAGAACTCAGATAATCATTTTGAGGATTCAACAAAATCTCGTTCAAGAGTTGTGCAGACTCATTCACAACATTTGAAAGCTGATAATGCAGAAGTTGGATCTCAAAACAAATTGTCAGAAATGAGTAGTAAATATAGAAATAATGAATCTGGGGTGAGCCGAGATACTGACTTGGAAGGTCGCAGTGAAAGCAATAGAGGAGTGCCTGCAAATGCATCTAAACAACAGGATGGCAAAGGGGGAATAGTTTTCTACCCAGTGAAAGAAAGTAAAAGGCAAACATCTAATTCAGTAGAAGAGATGGCTGATGGAGGAAAGGATTCTGGGTTTGCTGATAGAAATCATAGTGATCAAAAGAAGAGAGAATCATCTTCAGATGAAAATAGTTACTCTTTTTCAAAGTATGAAAAGGATGAGCCTGAATTGAAGGGCCCAATAAGGAGTTTTTCTCAATATAAAGAATATGTAGAGGAGTATCGTGACAAATATGATAGGTACACTTCCTTGCACAAGATTTTGGAGAGTTACAGGGACGAGTTTCAGAAACTAGGTGATGATTTACAGCAAGCTAAAGGCAGAGATATGGATAGATATTATGACCTTGTGGAGCAGCTGAAGGAATCCTATCGACGTTGTGGACCGAGACACAAGAGATTGAAGAAAATATTCGTTGTTCTTCATTTGGAATTGGAGAATATTAAACGAAGGATCACTGACTTTGCAAACTCCTATAATAAATGA 3660 0.4336 MYGGASSKLGRGAPNRRSFPPPPAPHRSSAPGGRLSLGASSRNAAKEVAATAAVEETFSLISGSNSLAFSMIIRLAPDLVEEIRRVESQGGTARMKFGPNPHNPSGNIIDVGGKEFRFTWSRELGDLCDIYEERKSGEDGNGLLVESGCAWRKLNVQRILDESTKNHVKRRSEEADRKMKSRKAIVLEPGNPPMKSQIKALAAVEATTWKNYSKKKEAALKKRKVETIQAGGPPKSSHRSGLTSTSTSTKGRHSSPQPSPPDPFAASSSPLGVVNMSKTSEDAVPAQMTGKQDTNVVSEKETSTRTNKAVRNTPGGKGPHGSKPADLQGMLISILKDKPSGMTLKALEKAVGDTLPNSIKKIEPIIKKIAKYQAPGRYILKPEVDLESLNKPQIESGSSPDDNHSQIPTREEFHDQTSAPQGESEEKVPNVDMEEMVNVKSKVEEDTNNLEKIDAQHTSPDILGDKKGSDYSEGQAGSSSDSGSDSDSDSDSSDSGSDSGSHSRSRSNAGSGSGSSSDSESDASSSSKEGLEGSDEDVDIMTSDDEKESKQKAEVSDQRMPLPIQGKSPDGRSMQNEVDEKQDGNESDAIEIEKDLPEERETELALPPATIPNRGGKYAEETRPVSIDYQQVQEGQNYTGSLFDEKESEVKDRSRHEQSDSSDRFSKGKHKRVSDVKSVDEKTERAKRLKAELSPGIDVQTLKNSRNLSPSEFTEDTGKGPNVQVLNRADRQANLSVGLQKGPNRAFPGKSSSDFPQKSSSQTHWENPSYSWEKSDKQGESVRHSKKHSANDFPAREASSVQKDKSHKDASNEDISATEKKVSRNSRDGSNGSKQPLFMDSYYQEQGEMVGKSREHRQSTQSHLGISPKESDRIGLDQSPVTNGRGVSLQRELSDLELGELRESTPDETHVAKQFERKGSFKQLENKTNNTSEDRNSDITRVKPSLKANSDSGKQSSAFVNSGLPSNLDNTYKKNSDNHFEDSTKSRSRVVQTHSQHLKADNAEVGSQNKLSEMSSKYRNNESGVSRDTDLEGRSESNRGVPANASKQQDGKGGIVFYPVKESKRQTSNSVEEMADGGKDSGFADRNHSDQKKRESSSDENSYSFSKYEKDEPELKGPIRSFSQYKEYVEEYRDKYDRYTSLHKILESYRDEFQKLGDDLQQAKGRDMDRYYDLVEQLKESYRRCGPRHKRLKKIFVVLHLELENIKRRITDFANSYNK* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1474 1219 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1110 1218 IPR010844 -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 270 311 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 974 988 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 746 769 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 405 468 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 217 326 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 626 643 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 770 827 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 644 692 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 698 739 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 895 941 - -
Pvu10g1474 1219 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 10 1219 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 233 255 - -
Pvu10g1474 1219 Coils Coil 436 456 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 472 486 - -
Pvu10g1474 1219 Pfam Occludin homology domain 1117 1214 IPR010844 -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 1 40 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 493 528 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 387 1110 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 989 1022 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 942 973 - -
Pvu10g1474 1219 Coils Coil 1146 1166 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 573 602 - -
Pvu10g1474 1219 SUPERFAMILY occludin/ELL-like 1118 1215 - -
Pvu10g1474 1219 MobiDBLite consensus disorder prediction 1078 1110 - -
Pvu10g1474 1219 Gene3D - 1121 1217 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1474 - - gmx:102660010 1861.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1474 10 41380316 41389080 Pvu10g1474 10 41380316 41389080 ECH