Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1459 GGGTTTCTTATTCTCTCCAGAGTGGTTGATTCTGTGTCCCAGAGACATTGGTTTTTTCATTCCAGGAGATCAGGATTGAAGATGAGATCAGCTCTGATGGTGGCAGTGTATGAAAAACAACTAAAGCTTTCAAGCTCAGCAAGGACAAGACACTCCACTGGTGAAATTATGAATTACATTGCAGTTGATGCATATCGCATGGGAGAATTTCCATGGTGGTTTCATATAACATGGGCATGTGCATTGCAAATTCTCCTATCTATAGGTATCCTTTATGGAGTTGTGGGAGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTCTCAATGTACCATTTGCCAAGATCCTACAAAAATGCATGGCAGAGTTCATGGTTTCACAGGATGAGCGTCTAAGAGCAACTTCAGAAATTATAAACAGCATGAAAATCATTAAGTTACA 452 0.4049 GFLILSRVVDSVSQRHWFFHSRRSGLKMRSALMVAVYEKQLKLSSSARTRHSTGEIMNYIAVDAYRMGEFPWWFHITWACALQILLSIGILYGVVGVGALPGLVPLLICGLLNVPFAKILQKCMAEFMVSQDERLRATSEIINSMKIIKL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1459 150 Pfam ABC transporter transmembrane region 20 149 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu10g1459 150 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 1 150 - -
Pvu10g1459 150 Gene3D ABC transporter type 1, transmembrane domain 1 150 IPR036640 GO:0005524|GO:0016021
Pvu10g1459 150 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 150 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu10g1459 150 SUPERFAMILY ABC transporter transmembrane region 2 150 IPR036640 GO:0005524|GO:0016021
Pvu10g1459 150 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1459 Pvu-Chr10 41242229 41242682 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1459 - - pvu:PHAVU_010G1404003 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1459 10 41242229 41242682 Pvu10g1459 10 41242229 41242682 ECH