Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1433 ATGATAGGAAGCTTCAACCAGACTGATTCAATTGAGTGCTGTGAAGCTGCAATGCAGAAAGCTTATTCTCAGGAATCTGGTCCTGCACTGAAGAAGTCAAAAACCAAAATTTTGGCTTCTCAAAATGTAGATTATTGTGAAATGGCAGAAAGTGAGGACAGACTTAGTGACATGCCAGATTGTCTTATTCATCACATCTTGTCATTTCTGGAAACAAAGGATGCTATTCAAACTTCTGTTTTATCAAAGAGGTGGAGGTATCTTTGGGTTTCAGTTCCCTGCCTGAATTTCAGTAGCAAATCATTCACTCGGTTGGTTGACTTCAAGAAGTTTGTGCTGTGGGTCCTAAACCACCGTGATTCTTCTCATGTCAAACTTCTTGTTTACTATCGCTTTGGGGTAGATTATGCCACAGATCAACATCTTTTGAATAAGGTTATTGAGTATGCAGCATCACATGGGGTTGAAGAAATCAAAATCAATCTCCGTGCAAAAACATCTGGTAGTCCTCCTGTTGAAATTCCTTTGTCTCTATTTTCTTGCCAATCTTTGAAAAAGCTTGAGTTAAAAGATTGCCATCCTACGAATGTGTCATCCCCTATAGGTTGCAAATCATTGGACCTGTTGCATCTGGAACAGTTTGCAATGGATCCTGCTGCTGCTGACTTTTCAAATCCATTTGCAAGTTTGGCAGAACTATTTGGTTTCACAACGTTGACAACCCTGCATCTAAATAACTTCACTCTGTGTTACACAGGAATTGACTGTCTGGATCCATTTGCTAATTGTGTCCATATGAAGAATTTGCACTTAAGTGAAATGTCCTTTAAGTCAGATTTGAACCCTAAGGATTTTGTGATATCTGCTCCCAAACTCAGTAACTTGAATCTAATGTGCAACCGCTTCAAATGCAAGATTGTAGTTGCTGCACCACAGCTTTCCAATTTCACTTACTTGTATTCTACACCTTGTGCTTTCTTTGAGTTCCGCCTTCCGTCTTTGGATGGCTTGGTCATTGATATACATGAACCACATGATCGATTTGAAAAATGTCGACGAAGGAAAAGAGAGGAGACTCTACATGGTTTGATCAACATGTTACGGGGATGTCATAGTGCAGAGGCTATTAAACTATCTTTCTGTACAGCTGCGGTAACTTGTGGAACTGCAGCCCTGTTAAAGCCAGAATCTTTGCCTCCTAGTAAATTGAAGTCATTGAACTTTGGAGTGGGATCAACATATAAAATCTTCATAAACAACCTTGACCATATAACTGCCTACTTCCGCAATTGTTCTCAGCATGCAGACTTTGAGATTGTGGCTGTTTAG 1329 0.3988 MIGSFNQTDSIECCEAAMQKAYSQESGPALKKSKTKILASQNVDYCEMAESEDRLSDMPDCLIHHILSFLETKDAIQTSVLSKRWRYLWVSVPCLNFSSKSFTRLVDFKKFVLWVLNHRDSSHVKLLVYYRFGVDYATDQHLLNKVIEYAASHGVEEIKINLRAKTSGSPPVEIPLSLFSCQSLKKLELKDCHPTNVSSPIGCKSLDLLHLEQFAMDPAAADFSNPFASLAELFGFTTLTTLHLNNFTLCYTGIDCLDPFANCVHMKNLHLSEMSFKSDLNPKDFVISAPKLSNLNLMCNRFKCKIVVAAPQLSNFTYLYSTPCAFFEFRLPSLDGLVIDIHEPHDRFEKCRRRKREETLHGLINMLRGCHSAEAIKLSFCTAAVTCGTAALLKPESLPPSKLKSLNFGVGSTYKIFINNLDHITAYFRNCSQHADFEIVAV* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1433 442 SUPERFAMILY F-box domain 45 104 IPR036047 GO:0005515
Pvu10g1433 442 ProSiteProfiles F-box domain profile. 52 105 IPR001810 GO:0005515
Pvu10g1433 442 PANTHER F-BOX PROTEIN-LIKE 39 442 - -
Pvu10g1433 442 SUPERFAMILY L domain-like 174 325 - -
Pvu10g1433 442 Pfam F-box domain 55 91 IPR001810 GO:0005515
Pvu10g1433 442 Gene3D Ribonuclease Inhibitor 142 337 IPR032675 -
Pvu10g1433 442 Gene3D - 39 95 - -
Pvu10g1433 442 PANTHER CYCLIN-LIKE F-BOX 39 442 - -
Pvu10g1433 442 SMART fbox_2 58 98 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1433 Pvu-Chr10 41015999 41019913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1433 51 219 EF-hand Containing Proteins AT5G41840 31.053 2.12e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1433 - - vun:114167379 852.818