Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1426 ATGCAAATGGTAACAACGGTAAGGCGTCTGGACTATGAGTCAAAGGAGGGCGAGACCACCTTCAGAACAATGAACTTCAACAAGTGCAGAAACCTTGATGAGTTGTATAAGCCTGAGGAGTTGGATGAGGTTATTACTGAGAAATCTACAAGCTTAAAGAAAAAGAAGGTGGGGAATCTGAAGCTGCAAACCACATTCTCCTTCAAATATCTACTTTCTGATAATTCTGATTCAAAGGAGAAAGATGATGCCTTGCTCAATAAACAAAGCCCCCCAATTGTGTTGCCAAATTCAGAAATTTTGTTTTTGTCAAAGCCCGTTGGGGAGCTTGATGTGGCTGCAGTCAAGCTGCAGAAGGTTTACAAGGGCTACAGGACCAGAAGAAATCTTGCAGATTGTGCAGTTATCTGTGAGGAGCTATGGTGGAAAGCCTTGGATTTTGCTGCTCTGAGCAGGTGTTCCTCATCAAAGTTTGACTCTGGTAAATCAGAAACAGCTAGTTCAAAATGGGCAAGAGCGAGGACCATGGCTGCTAAGGTGGGAAAAGGTTTGTCCAAAGATGATAAGGCGCAGGAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCACGTCACCGCTATGGACACAATCTGCACTTATACTATGATGTTTGGTTTCATAGCCAGAGTTCACAACCTTTTTTCTACTGGTTGGACGTTGGAGATGGGAAAGAAGTAAATCATGAGCAGTGCCTAAGAAGTGAATTGTATAAGCAATGCATAAAGTATCTTGGACCCAAAGAGAGGGAAGCATATGAAGTGGTTATTGAGGGAGGAAGGCTTGTTTATAAAAGGAGCCAGAACCTTGTTCACACTGTGGAGGGATCTAAGTGGATTTTTGTTCTTAGCTCTTCTAGAATTTTGTATGTTGGTGAGAAAAAGAAAGGTCAATTTCAGCACTCAAGTTTTTTGGCTGGAGGTGCTACTATTGCTTCTGGAAGATTGGTTGCCAAAGATGGAGTTATTGATGCGATATGGCCCTACAGCGGTCACTACCGTCCTACAATGAAGAACTTTATGGAATTCATTGGGTTCTTGCTGGAACATGATGTGGACTTGACCAATGTAAAGAAGTATGCAATTGATGATGACATCCCACCTTCAAAACCTGCTGATGAGGAGCTGCAGATGGCTAACAATGGTAGTTCAAGTGGCTTTACCATTGCCAAAAGCTGCACTGAAGACAATATAGGTCAATCTGGTAACAATATGCAAACTTCAACAGTTAAAGAGAGCAAGCCATTGTCAAGAAAATGGACAACTGGAGCTGGTCCTAGAATTGGTTGTGTGAGAGAGTACCCTGCAAAACTCCAAGTTAAGGCACTTGAACAGCTGAATCTATCACCAAGAGTCAACCATGGAAAAGTAGCAGCCAAGGCACCAATTCCCTCACCAAGGCCTAGTCCTAAAATCCACCTATCCCCAAGATTTGTGCACATGGGAATTCCTAGCCCATGA 1500 0.43 MQMVTTVRRLDYESKEGETTFRTMNFNKCRNLDELYKPEELDEVITEKSTSLKKKKVGNLKLQTTFSFKYLLSDNSDSKEKDDALLNKQSPPIVLPNSEILFLSKPVGELDVAAVKLQKVYKGYRTRRNLADCAVICEELWWKALDFAALSRCSSSKFDSGKSETASSKWARARTMAAKVGKGLSKDDKAQELALRHWLEAIDPRHRYGHNLHLYYDVWFHSQSSQPFFYWLDVGDGKEVNHEQCLRSELYKQCIKYLGPKEREAYEVVIEGGRLVYKRSQNLVHTVEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVAKDGVIDAIWPYSGHYRPTMKNFMEFIGFLLEHDVDLTNVKKYAIDDDIPPSKPADEELQMANNGSSSGFTIAKSCTEDNIGQSGNNMQTSTVKESKPLSRKWTTGAGPRIGCVREYPAKLQVKALEQLNLSPRVNHGKVAAKAPIPSPRPSPKIHLSPRFVHMGIPSP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1426 499 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 7 497 IPR044159 -
Pvu10g1426 499 ProSiteProfiles IQ motif profile. 110 139 IPR000048 GO:0005515
Pvu10g1426 499 MobiDBLite consensus disorder prediction 409 429 - -
Pvu10g1426 499 MobiDBLite consensus disorder prediction 409 434 - -
Pvu10g1426 499 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 7 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1426 Pvu-Chr10 40961688 40964851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1426 - - vra:106773785 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1426 10 40961688 40964851 Pvu5g1626 5 38354327 38358319 PCT