Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1409 ATGAGTTCAATAGGGGGAAAGTTGGTGAAGGGGAGGGTGGTGTTGATGCAGAATAGACTGGTTGAAGCCCTAACCAGTGCCAAGGATCTCATTAGCACTGGCATCAAGCTAATTGACAATTCAGTCGAATATGATATCACTAAATCTGTGTCTTTCAAGTTGATTAGTCGTACTAAGTCACATAACACAAAAAATGTGGCTGGGAAAGTTGGAAAGGAAAGCTATTTGGAGAATAAGGCTTCTGTGTTACGAAACTTGGGGGGCAAAGAGGAGGAATTCGACATTTATTTTGAATGGGATGATAATGAAATGGGAATTCCTGGAGCATTCTACGTAACAAACCGAATGAATGATGAGTTCTTACTTGTTAGTGTCACTCTTGAATATCCTCAACACGACCAAAACAATATTCACTTTGTGTGTAACTCGTGGGTTTACAACCATAAGTGTTACAAAACGGATCGCATTTTCTTTGCCAACATTCCATATCTTCCTGGTGAAGGGACACCAGTGGCATTACGAAGGTACAGAGAAGAGGAGTTGAAGAGTTTAAGGGGAAATGGAAATGGAAAGCTTGAGAAATGGGATAGGATTTATGAATATGAAGTGTATAATGATCTGGGCTTTCTAGACAGCGATGGACCACAGGAACACCCAGTTCTTGGAGGCCATAAGTATCCCTATCCTCGTAGGACTAGAACTGGGGGAAAACTCATCCGCAATGACAAGAATGGTGAGGAATACGAGGAACCAGCCAACGTTAGTTATATTCCAAGAGATGAACATTTCAGTCACGAGAAGGCTAAAGAATTCCTTGAATTCGGGAAAAAAACTTTTGAAAGAGTCCAACCCTTGCTCCTGTCTTTATACTTAAAGACCACAACAAACGAATTTAATGGCTTCGAAGAAGTGCAGAAAATGTATGAAGGTGGCCTTAATCTGCCTATATCTATCACTCGCAATCCAAATGTCCTTGAGTTCCCACAACCTTATCTAATCCAAGAAAGCAAGTTTGCATGGATGACCGATGAAGAATTTGCAAGAGAGATGATTGCGGGTGTAAACCCTGTTGTAATTCGCCGTCTTAAACTGGAAGATATCATATCGCCATATAAGCTACTTTGCAACTGTATTCAACCCAGTACAATAACAAAAGAACAGTTGGAGATCAACATGAATAAGCTCAAAGTAGATGAGGCAATGGCCTATGAGAGATTGTTCATATTAGATTACAGTGACGCATTCATGTCGTATTTGACAAAGATAAATGAGCTTCCTTCTGCAAAGGCTTACGCCACCAGGACATTCTTGTTCTTGAAAGATGATGGAACATTGAAACCACTTGCTATTGAATTAAGCAAGCCACATCAATGTGGAGATCGTTATTTGGGGAGCTTTACGGTGTTGCCTGCAGACAGAGGTGTTGAAAGTACAATTTGGCAATTGGCCAAAGCTCATGTTGTTGTAAATGACACCAACTATCATGAACTCGTAAGCCACTGGTTAAATACTCATGCAGTGATTGAGCCATTTGTCATAGCAACACACAGAAACCTCAGTGTACTTCACCCCATTTATAAACTTCTTTTTCCTCACTTTCGTGACACCATAAATATCAATACACTTGCTAGGAAAGCTCTAATTAATGCAGGTGGCATTATAGAGCAAACTTTTTTGCCTGGACCGTATTCTATGGAGATGTCTTCTGCTGTATACAAGAATTGGGTTTTCACTGACCAAGCATTACCAAACGATCTCATCAAAAGAGGAATGGCTGTTAAGGATAACTCTGCCCCTCATGGCCTTAGACTTTTGATAAAGGACTATCCTTATGCTGTTGATGGACTAGAAATATGGAATGCTATTAAGTTGTGGGTACAAAAGTACGTCTCTCTCTATTATTCAGATGATGGTGCAGTTGAACAAGATACTGAATTGCAAACATGGTGGAAGGAAGTTAAGGAGAAAGGTCACCCTGACTTAAAACCTGCACAATGGCCAAAACTGCAGACTTCTGAAGAGCTGGTTGAAACTCTGACTACCATTATATGGATTGGTTCAGCTCTTCATGCTGCTGTTAATTTTGGACAGTATCCTTATGGAGGTTATATGCTGAACCGTCCTACACAAAGCCGCAGATGGATCCCGGAACGAGGAACTCGAGAGTATGATGAGATTGGCAAGAATCCCCAAGAAGCTTTTCTGAAAACAATTACTCCAAAGTACCAGACAGTTATTGATCTTTCAGTGCTGGAGTTATTATCAACGCATTATTCAGATGAGGTATATCTTGGACAAAGGGACACTTTGGACTGGACTGCTGATCAAGATGCAAAAGACTTGTTCAAAACATTTACAGAACAGCTAAAAGAGATTGAGAGTGACATCTCTGAAAGAAACCATAACAAAGAACTTAAAAACCGAACTGGACCAATAAAATTGCCCTACACTTTGCTTCTTCCTACCAGTGAACCAGGGATGACTTTTAGAGGAATCCCTAACAGTGTTTCTATCTAA 2517 0.4041 MSSIGGKLVKGRVVLMQNRLVEALTSAKDLISTGIKLIDNSVEYDITKSVSFKLISRTKSHNTKNVAGKVGKESYLENKASVLRNLGGKEEEFDIYFEWDDNEMGIPGAFYVTNRMNDEFLLVSVTLEYPQHDQNNIHFVCNSWVYNHKCYKTDRIFFANIPYLPGEGTPVALRRYREEELKSLRGNGNGKLEKWDRIYEYEVYNDLGFLDSDGPQEHPVLGGHKYPYPRRTRTGGKLIRNDKNGEEYEEPANVSYIPRDEHFSHEKAKEFLEFGKKTFERVQPLLLSLYLKTTTNEFNGFEEVQKMYEGGLNLPISITRNPNVLEFPQPYLIQESKFAWMTDEEFAREMIAGVNPVVIRRLKLEDIISPYKLLCNCIQPSTITKEQLEINMNKLKVDEAMAYERLFILDYSDAFMSYLTKINELPSAKAYATRTFLFLKDDGTLKPLAIELSKPHQCGDRYLGSFTVLPADRGVESTIWQLAKAHVVVNDTNYHELVSHWLNTHAVIEPFVIATHRNLSVLHPIYKLLFPHFRDTININTLARKALINAGGIIEQTFLPGPYSMEMSSAVYKNWVFTDQALPNDLIKRGMAVKDNSAPHGLRLLIKDYPYAVDGLEIWNAIKLWVQKYVSLYYSDDGAVEQDTELQTWWKEVKEKGHPDLKPAQWPKLQTSEELVETLTTIIWIGSALHAAVNFGQYPYGGYMLNRPTQSRRWIPERGTREYDEIGKNPQEAFLKTITPKYQTVIDLSVLELLSTHYSDEVYLGQRDTLDWTADQDAKDLFKTFTEQLKEIESDISERNHNKELKNRTGPIKLPYTLLLPTSEPGMTFRGIPNSVSI* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1409 838 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 10 838 - -
Pvu10g1409 838 ProSitePatterns Lipoxygenases iron-binding region signature 1. 495 509 IPR020833 GO:0016702|GO:0046872
Pvu10g1409 838 Pfam Lipoxygenase 173 821 IPR013819 GO:0016702|GO:0046872
Pvu10g1409 838 Gene3D - 339 471 - -
Pvu10g1409 838 Gene3D - 267 338 IPR027433 -
Pvu10g1409 838 ProSitePatterns Lipoxygenases iron-binding region signature 2. 522 532 IPR020834 GO:0016702|GO:0046872
Pvu10g1409 838 Gene3D PLAT/LH2 domain 4 163 - -
Pvu10g1409 838 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 162 838 IPR013819 GO:0016702|GO:0046872
Pvu10g1409 838 SMART LH2_4 7 160 IPR001024 GO:0005515
Pvu10g1409 838 SUPERFAMILY Lipoxigenase 169 838 IPR036226 -
Pvu10g1409 838 Gene3D - 164 266 - -
Pvu10g1409 838 Gene3D - 473 837 - -
Pvu10g1409 838 PRINTS Plant lipoxygenase signature 129 147 IPR001246 GO:0016491
Pvu10g1409 838 PRINTS Plant lipoxygenase signature 155 176 IPR001246 GO:0016491
Pvu10g1409 838 PRINTS Plant lipoxygenase signature 195 211 IPR001246 GO:0016491
Pvu10g1409 838 PRINTS Plant lipoxygenase signature 227 246 IPR001246 GO:0016491
Pvu10g1409 838 PRINTS Plant lipoxygenase signature 295 316 IPR001246 GO:0016491
Pvu10g1409 838 PRINTS Plant lipoxygenase signature 431 455 IPR001246 GO:0016491
Pvu10g1409 838 PRINTS Plant lipoxygenase signature 751 765 IPR001246 GO:0016491
Pvu10g1409 838 Pfam PLAT/LH2 domain 58 158 IPR001024 GO:0005515
Pvu10g1409 838 PRINTS Lipoxygenase signature 477 494 IPR013819 GO:0016702|GO:0046872
Pvu10g1409 838 PRINTS Lipoxygenase signature 495 512 IPR013819 GO:0016702|GO:0046872
Pvu10g1409 838 PRINTS Lipoxygenase signature 515 535 IPR013819 GO:0016702|GO:0046872
Pvu10g1409 838 ProSiteProfiles PLAT domain profile. 25 159 IPR001024 GO:0005515
Pvu10g1409 838 PANTHER LIPOXYGENASE 10 838 IPR000907 GO:0016702|GO:0046872
Pvu10g1409 838 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 9 163 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1409 Pvu-Chr10 40820143 40823583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1409 7 838 Acyl Lipid Metabolism Gene Families AT1G55020 51.339 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1409 K15718 - gmx:100802685 1202.58