Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1407 ATGTGGATGAGGGCACGGGGAAGGCCAACAATGGGGAGTGGTGAATACGAGGAACCAGCCGAGGATAATTATGTGCCAAGAGATGAAAATTTCAGTAACATGAAAGCAAAAGAATTCCTTGAAATAAGAAAAAAAAGTTTTGGAAGAGTCGAACCCTTGCTCCACTCTTTATATTTAAAGACCACAACGAACGAATTTAATGGCTTCGAAGAAGTGCAGAGACTGTATGAAGGTGGCGTTAATCTGCCTATATCTATCCCTGGCAATAGTACTCCAAGTGTCCTTGAGTTCCCAACACCTCATGTAATCAAAGAAAGCAAGTTTGCATGGATGACGGATGAAGAATTTGCGAGAGATATGATTGCCGGTGTAAACCCTATTGTAATTCGCCTTCTTAAAATGGAGGAGCTGGCATCGCCATGCAAGCTACTTTGCAACTGTACTCAACCAAGTACAATAACAAAAGAAAAGTTGGAGATCAACATGAATAGGGTCAAAGTAGATGAGGCATTGGCTCATGGGAGATTGTTTATATTAGATTACTATGACGCATTCATGCCGTATTTGACCAAGATAAACGAGCTTCCTTCTGCAAAGGCTTATGCCACCAGAACATTCTTCAAGCCACATCAATGTGGAGATCGTTATTTGGGTACCGAGAGCACAGTGGTGCTGCCTTCAGAGAAAGGTGCGGAAAGTACAATTTGGCAATTGGCCAAAGCTCATGTTGTAGTAAATGACACCAACTATCATCAGCTCATAAGCCACTGGTTAAATACTCATGCAGTGATTGAGCCATTCGCCATAGCAACACATAGGAACCTCAGTGTACTTCACCCCATTTATAAACTTCTTCATCCTCACTTCCGTGACACCATAAGTATCAATGCACTTGCTAGGAAATCCCTAATTACTGCAGGTGGCATCGTAGAGCAAACTTTTTTGCCTGGACCGTATTCCTTGGAGATGTCTTCCGCTGCATACAAGAATTACCAAACATTACCAAACGATCTCATCAAAAGAGGAATGGCGGTTAAGGATGTCTCTGCCCCTCATGGCCTTAGTCTTGCGATAAAGGACTATCCTTATGCTGTTGATGGACTAGAAATATGGGATGGTATAAAGAGTTGGGTACAAGAGTACGTCTCTCTGTATTATTCAGAAGATGATGCAGTTCAACAAGATACTGAATTACAAAAATGGTGGAAAGAAGTTGTGGAGAAGGGTCACGGTGACTTAAAAGATGCAAAATGGCCTGAAATGAAGACTTCTGAAGAGCTGGTTGAAACTTGCACTACCATTATATGGATTGGTTCAGCTCTTCATGCTGCTGTTAATTTTGGACAGTATCCTTATGGAGGTTACATTCTGAACCGTCCTCCACAAAGCCGAAGATGGATCCCAAAAGAAGGAACTCCAGAGTATGATGAGATGATAAAGAATCCTCAAGAAGCTTATTTGAAAACAATTACTCCAAAGTACCAGACCGTTATTGATCTTACAGTGATGGAGATTCTATCAAGGCATACATCATACGAGGTGTATCTTGGACAAAGAGACAGCTTGGACTGGACTGCTGATCAACATGCAAAAGATTTGTTCAAATCATTTACAGAACGCCTAAAAGAGATTGAGGATGAAATCTCTAAAAGGAACCTTAACCAAGAACTTAGAAACCGAACTGGACCAATCAACTTGCCCTACACTGTGCTTCTTCCAACCAGTGAAAAGGGGATAACTTTCAGAGGAATCCCTAACAGTGTCTCTATCTAA 1773 0.4151 MWMRARGRPTMGSGEYEEPAEDNYVPRDENFSNMKAKEFLEIRKKSFGRVEPLLHSLYLKTTTNEFNGFEEVQRLYEGGVNLPISIPGNSTPSVLEFPTPHVIKESKFAWMTDEEFARDMIAGVNPIVIRLLKMEELASPCKLLCNCTQPSTITKEKLEINMNRVKVDEALAHGRLFILDYYDAFMPYLTKINELPSAKAYATRTFFKPHQCGDRYLGTESTVVLPSEKGAESTIWQLAKAHVVVNDTNYHQLISHWLNTHAVIEPFAIATHRNLSVLHPIYKLLHPHFRDTISINALARKSLITAGGIVEQTFLPGPYSLEMSSAAYKNYQTLPNDLIKRGMAVKDVSAPHGLSLAIKDYPYAVDGLEIWDGIKSWVQEYVSLYYSEDDAVQQDTELQKWWKEVVEKGHGDLKDAKWPEMKTSEELVETCTTIIWIGSALHAAVNFGQYPYGGYILNRPPQSRRWIPKEGTPEYDEMIKNPQEAYLKTITPKYQTVIDLTVMEILSRHTSYEVYLGQRDSLDWTADQHAKDLFKSFTERLKEIEDEISKRNLNQELRNRTGPINLPYTVLLPTSEKGITFRGIPNSVSI* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1407 590 Gene3D - 108 215 - -
Pvu10g1407 590 PANTHER LIPOXYGENASE 7 590 IPR000907 GO:0016702|GO:0046872
Pvu10g1407 590 PRINTS Plant lipoxygenase signature 63 84 IPR001246 GO:0016491
Pvu10g1407 590 PRINTS Plant lipoxygenase signature 503 517 IPR001246 GO:0016491
Pvu10g1407 590 Gene3D - 35 107 IPR027433 -
Pvu10g1407 590 ProSitePatterns Lipoxygenases iron-binding region signature 2. 278 288 IPR020834 GO:0016702|GO:0046872
Pvu10g1407 590 MobiDBLite consensus disorder prediction 1 24 - -
Pvu10g1407 590 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 7 590 - -
Pvu10g1407 590 SUPERFAMILY Lipoxigenase 14 590 IPR036226 -
Pvu10g1407 590 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 590 IPR013819 GO:0016702|GO:0046872
Pvu10g1407 590 Pfam Lipoxygenase 17 573 IPR013819 GO:0016702|GO:0046872
Pvu10g1407 590 Gene3D - 229 589 - -
Pvu10g1407 590 PRINTS Lipoxygenase signature 233 250 IPR013819 GO:0016702|GO:0046872
Pvu10g1407 590 PRINTS Lipoxygenase signature 251 268 IPR013819 GO:0016702|GO:0046872
Pvu10g1407 590 PRINTS Lipoxygenase signature 271 291 IPR013819 GO:0016702|GO:0046872
Pvu10g1407 590 ProSitePatterns Lipoxygenases iron-binding region signature 1. 251 265 IPR020833 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1407 Pvu-Chr10 40781969 40784432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1407 22 590 Acyl Lipid Metabolism Gene Families AT1G55020 52.217 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1407 K15718 - gmx:100802685 843.958