Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1406 ATGAGTTCAATAGTGGTGAAGGTGAAGTTGGTGAAGGGGAAGGTGGTGTTGATTCGGAAGACTCTGGTTGAAACCCTAACCAACCCTAAGGCTCTCATTGGCACTGGCTTCAAGCTAATTAACTCTTTTGTCGATGATATCACTAAATCTGTGTCTTTCAAGTTGATTAGTAGTACCAACTCACAAGATCATCCAACAAATGTGGCTGGGAAAGTGGGAAAGGATAGCCACTTGGAGAATAAAGCTTCTGTGTTACGAACCTTGGAGGGCACAAAGGAGGAGTTTGATATTTATTTTGAATGGGATCATAATGAAATGGGAATTCCAGGAGCATTCTACGTTACAAACTTAATGAGTGATGAGTTCTTCCTTGTCAGTTTGACTCTTGAATATCCAACAAGTGACCACGACCAAAACAATATCCACTTTGTGTGTAACTCGTGGGTTCATAATGACCACAAAACAGGTCGCATTTTCTTTGCCAACATTCCATATCTTCCTAAAGGGACACCAGTGACATTACAAAAGTACAGAGAAGAAGAGTTACAGAATTTAAAGGGAGATGGAACTGGAAAGCGTGAGAAAGGGGATAGGATTTATGACTATGATGTCTATAATGATCTGGGCACTCTACCCATCGATAAACAAGAAGATCACCCAGTTCTTGGAGGCCCGAAATATCCCTACCCTCGTAGGGTTAGAACTGGGAGAAAACTCATCCACAATAACAACAATGGTGGTGAATACGAGGAACTAGCCGAGGATAATTATGTGCCAAGAGATGAAAGTTTCAGTAACGTGAAGGGTAAAGAATTCCGTGAATTAGGAAAAGAAAGTTTAGGAAGAATCCAACCCTTGCTCCTCTCTTTATATTTAAAGACCACAACAAACGAATTTAATGGCTTCGAAGAAGTGCAGAAAATGTATGAAGGTGGCGTTAATCTTCCTATATCTATCACTGGGAATGCTACTCCAAGTGTCCTTCAGTTCCCACTACCTAATGTAATCAAAGAAAGCAAGTTTGCATGGATGACCGATGAAGAATTTGCGAGAGAGATGATTGCGGGTGTAAACCCTGTTGTAATTCGCCGTCTTAAATTGGAAGATATCATAAGCATATCGCCATACAAGCCACTTTGCAACTGCACTCAACCCAGTACAATAACAAAAGAACAGTTGGAGATCAACATGGATGAGGTTAAAGTAGATGAGGCATTGGTTGATGGAAAGTTATTCATATTAGATTACTATGACGCATTCATGCCTTATTTGACGAAGATAAACGAGCTTCCTTCTGCAAAGGCTTATGCCACCAGGACATTCTTGTACTTGAAAGAGGACGGGACATTGAAACCACTTGCTATTGAATTAAGCAAGCCACATAAATGTGGAGATATTTATTTGGGTATCGAGAGTATAGTGGTGAAGCCTGCAGACAGAGGTGTTGAAAGTACAATTTGGCAATTGGCCAAAGCTCATGTTGTTGTAAATGACACCAACTATCATCAGCTCATAAGCCACTGGTTAAATACTCATGCAGCGATTGAGCCATTTGCCATAGCAACACACAGGAACCTCAGTGTACTTCACCCCATTTATAAACTTCTTCATCCTCACTTCCGTGACACCATAAACATCAATGCACTTGCTAGGAAATCCCTAATTACTGCAGGTGGCATTTTAGAGCAAACTTTCTTGCCTGGACCGTATGCTATGGAGATGTCTTCCGCTGTATACAAGAATTGGGTTTTCACCGACCAAGCATTACCAAACGATCTCATCAAAAGAGGAATGGCGGTTAAGGATGACTCTGTCCCTCATGGGCTTAGACTTTTGATAAAGGACTATCCTTATGCTGTTGATGGACTAGAAATATGGAATGCTATTAAGTTGTGGGTACAAAAGTACGTCTCTCTGTATTATTCAGATGATGATGCAGTTCAACAAGATGATGAATTGAAAAATTGGTGGAAGGAAGTTGTGGAGAAAGGTCACCCTGACTTAGAAGCTGCACAATGGCCTGAAATGAAGACTTCTCAAGAGCTGGTTGAAACTTGCACTACCATTATATGGATTGCTTCAGCTCTTCATGCTGCTGTTAATTTTGGACAGTATCCTTATGGAGGTTACATTCTGAACCATCCTACACAAAGCCGAAGATGGATCCCAAAAGAAGGAACTCCAGAGTATGATGAGATGAGCAAGAAACCTCAAGAAGCATTTTTGAAAACAATTACTCCAAAGTACCAGACAGTTGTTGATCTTTCAGTGTTGGAGTTATTATCAACGCATTCTTCTGACGAGGTATATCTTGGACAAAGAGACACTTTGGACTGGACTGGTGATCAAAAGGCAAAAGTTGCGTTCACATCATTTACAGAACGCCTAAAACAGATTGAGGATGATATCTCTGAAAGGAACCTTAACCAAGAACTCAAAAACCGAACTGGACCAATCAAATTTCCCTACACTGTGCTTCTTCCCACCAGTGAAAAAGGGATAACTTTCAGAGGAATCCCTAACAGTATCTCTATCTAA 2538 0.4074 MSSIVVKVKLVKGKVVLIRKTLVETLTNPKALIGTGFKLINSFVDDITKSVSFKLISSTNSQDHPTNVAGKVGKDSHLENKASVLRTLEGTKEEFDIYFEWDHNEMGIPGAFYVTNLMSDEFFLVSLTLEYPTSDHDQNNIHFVCNSWVHNDHKTGRIFFANIPYLPKGTPVTLQKYREEELQNLKGDGTGKREKGDRIYDYDVYNDLGTLPIDKQEDHPVLGGPKYPYPRRVRTGRKLIHNNNNGGEYEELAEDNYVPRDESFSNVKGKEFRELGKESLGRIQPLLLSLYLKTTTNEFNGFEEVQKMYEGGVNLPISITGNATPSVLQFPLPNVIKESKFAWMTDEEFAREMIAGVNPVVIRRLKLEDIISISPYKPLCNCTQPSTITKEQLEINMDEVKVDEALVDGKLFILDYYDAFMPYLTKINELPSAKAYATRTFLYLKEDGTLKPLAIELSKPHKCGDIYLGIESIVVKPADRGVESTIWQLAKAHVVVNDTNYHQLISHWLNTHAAIEPFAIATHRNLSVLHPIYKLLHPHFRDTININALARKSLITAGGILEQTFLPGPYAMEMSSAVYKNWVFTDQALPNDLIKRGMAVKDDSVPHGLRLLIKDYPYAVDGLEIWNAIKLWVQKYVSLYYSDDDAVQQDDELKNWWKEVVEKGHPDLEAAQWPEMKTSQELVETCTTIIWIASALHAAVNFGQYPYGGYILNHPTQSRRWIPKEGTPEYDEMSKKPQEAFLKTITPKYQTVVDLSVLELLSTHSSDEVYLGQRDTLDWTGDQKAKVAFTSFTERLKQIEDDISERNLNQELKNRTGPIKFPYTVLLPTSEKGITFRGIPNSISI* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1406 845 SUPERFAMILY Lipoxigenase 167 845 IPR036226 -
Pvu10g1406 845 ProSitePatterns Lipoxygenases iron-binding region signature 2. 529 539 IPR020834 GO:0016702|GO:0046872
Pvu10g1406 845 PRINTS Plant lipoxygenase signature 133 151 IPR001246 GO:0016491
Pvu10g1406 845 PRINTS Plant lipoxygenase signature 157 178 IPR001246 GO:0016491
Pvu10g1406 845 PRINTS Plant lipoxygenase signature 196 212 IPR001246 GO:0016491
Pvu10g1406 845 PRINTS Plant lipoxygenase signature 228 247 IPR001246 GO:0016491
Pvu10g1406 845 PRINTS Plant lipoxygenase signature 296 317 IPR001246 GO:0016491
Pvu10g1406 845 PRINTS Plant lipoxygenase signature 436 460 IPR001246 GO:0016491
Pvu10g1406 845 PRINTS Plant lipoxygenase signature 758 772 IPR001246 GO:0016491
Pvu10g1406 845 ProSiteProfiles PLAT domain profile. 27 163 IPR001024 GO:0005515
Pvu10g1406 845 SMART LH2_4 9 162 IPR001024 GO:0005515
Pvu10g1406 845 Pfam Lipoxygenase 174 828 IPR013819 GO:0016702|GO:0046872
Pvu10g1406 845 PRINTS Lipoxygenase signature 484 501 IPR013819 GO:0016702|GO:0046872
Pvu10g1406 845 PRINTS Lipoxygenase signature 502 519 IPR013819 GO:0016702|GO:0046872
Pvu10g1406 845 PRINTS Lipoxygenase signature 522 542 IPR013819 GO:0016702|GO:0046872
Pvu10g1406 845 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 164 845 IPR013819 GO:0016702|GO:0046872
Pvu10g1406 845 ProSitePatterns Lipoxygenases iron-binding region signature 1. 502 516 IPR020833 GO:0016702|GO:0046872
Pvu10g1406 845 Gene3D - 268 340 IPR027433 -
Pvu10g1406 845 Gene3D - 341 478 - -
Pvu10g1406 845 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 7 845 - -
Pvu10g1406 845 Gene3D - 166 267 - -
Pvu10g1406 845 Pfam PLAT/LH2 domain 66 160 IPR001024 GO:0005515
Pvu10g1406 845 Gene3D PLAT/LH2 domain 1 165 - -
Pvu10g1406 845 Gene3D - 480 844 - -
Pvu10g1406 845 PANTHER LIPOXYGENASE 7 845 IPR000907 GO:0016702|GO:0046872
Pvu10g1406 845 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 11 165 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1406 Pvu-Chr10 40770570 40774275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1406 8 845 Acyl Lipid Metabolism Gene Families AT1G55020 50.115 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1406 K15718 - gmx:100802685 1156.35