Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1405 CTCGAGATCAATTTAAACAACATATATGTTCTTCTATACACTCTCATAATATCCAATTTCGTTATTCTTTTTTCTTCAACATTTTTTAAGTTGATTGGTGTGCCTTATGGACTATGTTTTCAACAATTACAAGATCTATCGAATCAAGTACATGTTGATGGAAATGGTGTTATCGACTTTGACGAGTTCAAGAAGATTTGGAATTCGGCATGTCCAAATCATGTCTTAGAAAACTTGAATGGGTGCATGGAAGATGTTAACACAGAATTGGAGCAGCAAGAAGCCATTGGTTTTATGATAAAGAATGCAATGTTGTATCCGCGTGAAGTGGAGAAAGGACTATGGCCAGAAGATTATTCTGAGGGAAGAAAAACAAAAACCATCAAGTGTTTACTTTCTCCAAGCATAAACCACCAAGGAAAAACCAAAAGGAACCACCAATTCATTCTCCTCCACGCTGGACCATTCCATGACAGAGGAACTCCCTCCAAAACACCCAACAAAACAAGAAACCAACAGCGAAGAAGACGACCAACTCTTTCCATTTTTACCACCATCACTATTGTCATTCACATCACTATTTTTACCATACTTTACATGCATCGAATAGGATAA 615 0.3707 LEINLNNIYVLLYTLIISNFVILFSSTFFKLIGVPYGLCFQQLQDLSNQVHVDGNGVIDFDEFKKIWNSACPNHVLENLNGCMEDVNTELEQQEAIGFMIKNAMLYPREVEKGLWPEDYSEGRKTKTIKCLLSPSINHQGKTKRNHQFILLHAGPFHDRGTPSKTPNKTRNQQRRRRPTLSIFTTITIVIHITIFTILYMHRIG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1405 204 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 40 120 - -
Pvu10g1405 204 Coils Coil 76 96 - -
Pvu10g1405 204 SUPERFAMILY EF-hand 20 74 IPR011992 -
Pvu10g1405 204 ProSiteProfiles EF-hand calcium-binding domain profile. 52 73 IPR002048 GO:0005509
Pvu10g1405 204 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 40 120 - -
Pvu10g1405 204 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1405 Pvu-Chr10 40756462 40757298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1405 14 120 EF-hand Containing Proteins AT1G02270 40.187 2.93e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1405 - - pvu:PHAVU_010G135200g 407.527