Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1397 ATGGAACAAGAGGGAGACACTTTCACAATGCCGCCGTTCTGGGCGGCGGAGAACCGTGACCGCCGCCTTTTCCGCCGCTCTTACTCTCTTTTACGGACCTCCACGTCCCTCTTCGTACTATTCCTCGTACTCGCGCTGGTTTTCTCGCTCATCGTAGTTCCGACATTGCACTCGTTCGCTTCCAACATCTTTAAACCTCGTACGGTGAAAAACAGCTGGGATTCCCTCAACCTCGTACTCGTGCTCTTCGCCATTGTTTGTGGCTTCCTCAGCAGAAACACCACCTCCGAAACCCCAACCAGTTCTCGTAGAACTTTTTCCAACCCTTCCACGCCGCCACCAACGTGGTACCAATACGATTACTCTCACAGCCACACTCCTCGTCGATCGTTTAATAGGCTGAGGAGCTTCAACTCCTACCCCGATCTCCGCCAACCGATCGCCGCCGATGAAAGGTTCCGGTTTTACGATGATACTTACCTCCTACAGCATCGGCACCCGAGTAATGAGGCTGAAGAAGAAGAAAAAGAAATAGGAATTGAAAATGTCGTCACCGCGCCGCCGCCGCAACAAGGGACGCAGACTGTTCGGAGAAATGTCCAGCGAGCGTGTCAAGTGGAAACTGTGGAGAAACATGAAACGGATGATGTAGATGCGAAGATTTTACCGCCGCCGCCGGCGATTAAAACGCAAGTTGTTCGGCGAAGTGTCAAGCGGTTACAACGATCGGAAACCGTGGAGAAACACGAAACAGATGATTCAGCTGTGGAGAAGATTTCACTCTCGCCGCCATCTACTCCGCCGCCGGCGACGAGAACGCAAGATGTTCGGAGAAAAGCCAAGCGAACATATCAAGCGGAAACCATCGAGAAACTTGAACTAAACGATTTAGATTCGCAGAGTTCACAACCTTCGCCGTCGCCGCTGATGATTCGAACGAAGGGTGTTCAACGAAATGCTAAACCGGAAAGAGACAATTCGTTTGTAAAGAGTGAACCGCCGCCGCCACCACCTCCACCGCAGCACCCGGCGGAGGCGAAGACGGCGCAGGGTAAGAAGAAAAGAGGGACTCCCACTATAGAGTTCTGGACATCTTTAAGAGGGAAGAAGAAGAAACTAAGGCAAAGAAGCGTTGAAAATTTTGATAGCATTTTCAATTCTGAAGCGTTATTGGCACAACCGCCTGCACCGCCGCCGCCCCCGCCGCCTAAAGTTTTTCAGAACTTATTTTCTTTGAAGAAAGCGAAACACAAGACCCCCCACAGTGTTTCTGTGGCAATAACAAGAGTATCAAACAAGAGGGAACCTGGTTCTTCTTCTTCCTCTACCTTGAAAGATAAAGTGATGATGGCTGGTAATGAGTCACCATTAAACCCCATTCCTCCTCCGCCGCCGCTTCCGCCGTTCAAGTTGCCAGGGTGGAAGTTCCGGGTGCAGGGTGACTATGTCAGGGTTGACAGCACTGGTAGTTCACGCAGTGGATCACCTGATTTGGATGAAGTTAGTGTGGACACACCAACAACTCATGACGAAACAAGCAAAGTGAATCCTCCTTTTGCCAAAGATGGTGAAGATTCTGCAAGTGTGAGTGCACCTTCATTGTTCTGTCCTAGCCCTGATGTTGATACCAAAGCTCACAACTTCATTGAGAGCTTCAGGGCTGGTTTGAGGATGGCCAAGATGAACTCCATGAATGAGAGGCATGGGATTAGAAGGTCCAATCTTGGACCTTCACCACCCCATGAATGGTGA 1752 0.5046 MEQEGDTFTMPPFWAAENRDRRLFRRSYSLLRTSTSLFVLFLVLALVFSLIVVPTLHSFASNIFKPRTVKNSWDSLNLVLVLFAIVCGFLSRNTTSETPTSSRRTFSNPSTPPPTWYQYDYSHSHTPRRSFNRLRSFNSYPDLRQPIAADERFRFYDDTYLLQHRHPSNEAEEEEKEIGIENVVTAPPPQQGTQTVRRNVQRACQVETVEKHETDDVDAKILPPPPAIKTQVVRRSVKRLQRSETVEKHETDDSAVEKISLSPPSTPPPATRTQDVRRKAKRTYQAETIEKLELNDLDSQSSQPSPSPLMIRTKGVQRNAKPERDNSFVKSEPPPPPPPPQHPAEAKTAQGKKKRGTPTIEFWTSLRGKKKKLRQRSVENFDSIFNSEALLAQPPAPPPPPPPKVFQNLFSLKKAKHKTPHSVSVAITRVSNKREPGSSSSSTLKDKVMMAGNESPLNPIPPPPPLPPFKLPGWKFRVQGDYVRVDSTGSSRSGSPDLDEVSVDTPTTHDETSKVNPPFAKDGEDSASVSAPSLFCPSPDVDTKAHNFIESFRAGLRMAKMNSMNERHGIRRSNLGPSPPHEW* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1397 583 MobiDBLite consensus disorder prediction 417 446 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 295 312 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 274 294 - -
Pvu10g1397 583 PANTHER COTTON FIBER (DUF761) 1 118 - -
Pvu10g1397 583 PANTHER COTTON FIBER (DUF761) 129 579 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 329 344 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 485 514 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 424 446 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 232 375 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 485 543 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 237 256 - -
Pvu10g1397 583 MobiDBLite consensus disorder prediction 563 583 - -
Pvu10g1397 583 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 118 - -
Pvu10g1397 583 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 129 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1397 Pvu-Chr10 40636672 40638945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1397 - - gmx:100799093 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1397 10 40636672 40638945 Pvu10g1397 10 40636672 40638945 ECH
Pvu5g1611 5 38237204 38239106 Pvu10g1397 10 40636672 40638945 PCT