Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1393 ATGGCGAATTGGCTGGCAATCAAGAACAAGGAGGAATGGCTGAAGGACATGAGAGGGAATCTGAGTTTGGCTGCTACCATAATCACAACCATCACCTTTCAAACTGCTATTAATCCACCAGGTGGTGTTAGGCCAGCCACAGAGAATGAAAAATTGAAATGTCCAGAAAATTTAGAAAATAATCCATGCCCTGGTGAATCTGTCCTAGCTATAGTTTACCAAGAAGCTTATGTCAGATTTCTTCTATTCAACACTATATGTTTCGTTTCATCTTTAGCTGTGTGTCTCTTGCTTGTGAGTGGTTTCTCTCTGAATAACAGATTTTTCACATGGCTTTTGTCAATAGGCATGTGCATCACCATGACCACTCTCACTTTGACCTACATGATTGGTGCAGATATGGTCACACCTTATCCCGTTTGGTATAGAACCCAAACCATGTATAATAAAGTCATTTACACTTGGCTTGCACTCCTAGGACTCATCATACTTTTCCTTTGTCTGCGTCTATTTGTTTGGATTGTCACTAAATGTATTGGCAAACGTAAATGA 552 0.4004 MANWLAIKNKEEWLKDMRGNLSLAATIITTITFQTAINPPGGVRPATENEKLKCPENLENNPCPGESVLAIVYQEAYVRFLLFNTICFVSSLAVCLLLVSGFSLNNRFFTWLLSIGMCITMTTLTLTYMIGADMVTPYPVWYRTQTMYNKVIYTWLALLGLIILFLCLRLFVWIVTKCIGKRK* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1393 183 PANTHER - 10 143 - -
Pvu10g1393 183 Pfam Domain of unknown function 11 132 IPR026961 -
Pvu10g1393 183 PANTHER CASKIN 10 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1393 Pvu-Chr10 40566495 40567046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1393 8 170 Miscellaneous Gene Families AT1G34050 22.892 2.62e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1393 - - pvu:PHAVU_010G134000g 330.487