Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1390 ATGCAAGATATATCAGTTACAATGGATGAAAAGCTGAAAGAAGAGAAAAAATGGTGGAAAAAAGGTATAGAAAAAATGGCGAATTGGTTGGCAATCAAGAACAAGGATGATTGGCTAAAGGACATGAGAGGTAATCTCAGTTTGGCTGCTACCATAATCACAACCATCACCTTTCAAACTGCTATTAATCCACCGGGTGGTGTTAGACCAGCAACAGAAAGTGGATATGTGGAATGTACAAAAAATTTAAATGGTAATCCATGTCCTGGTGAATCTGTCATAGCTGTAGTTTACCCAGACGCTTATGTCAAATTCCTTCTATCAAACACTATATGCTTTGTTTCATCCTTGGCTATGTGTCTCTTGCTTGTGAGTGGCTTCCCTCTGAATAACAGATTTTTCACATGGCTTTTGTCAATATGCATGTGCATCACCATGACCAGTCTCACTGTGACCTACATGCTTGGTGCAGATATGGTCACACCTTATCCCGTTTGGCATACAACCAAAACCATATTTTATAATGTCATTTACATTTGGCTTGCACTCCTAGGACTCGTCACACTTGTCCTCTGTCTGCGTCTATTTGTTTGGATTGTCACTAAATGCTTTGACAAACGTAAATGA 627 0.3939 MQDISVTMDEKLKEEKKWWKKGIEKMANWLAIKNKDDWLKDMRGNLSLAATIITTITFQTAINPPGGVRPATESGYVECTKNLNGNPCPGESVIAVVYPDAYVKFLLSNTICFVSSLAMCLLLVSGFPLNNRFFTWLLSICMCITMTSLTVTYMLGADMVTPYPVWHTTKTIFYNVIYIWLALLGLVTLVLCLRLFVWIVTKCFDKRK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1390 208 PANTHER - 16 168 - -
Pvu10g1390 208 PANTHER CASKIN 16 168 - -
Pvu10g1390 208 Pfam Domain of unknown function 37 157 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1390 Pvu-Chr10 40544066 40547589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1390 11 197 Miscellaneous Gene Families AT1G14480 26.455 1.57e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1390 - - pvu:PHAVU_010G134000g 288.5