Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1383 ATGAATTTGGAACAAATTGGGCAGCCTAAATCATCTAATGGATACATCCGTCGAAAATCTGAGAAAGACGGAGCAACTAAGTCTGATTACAAGATCCCCTCTGGAAAGTCAAATGCCAGCAGCAGATTACCGAGTACAGGTGTAGTGTCTGACAATAAAGGTGGTAGTTATGGGAGTCCTTCACATGATCGACTAGTATATTTAACATCATGCCTTATTGGGCAGCATGTGGAAGCCCAGGTGAAAAACGGATCTATATACTCTGGAATATTTCATGCAACAAATACTGACAAAGATTATGGAATCATTTTGAAAATGGCTTGTTTGACAAAGGATGGCTCCTTGCAAGGACAGAGATTTCGTGTAGAATCTTTCAGCAAAGCTCCTTCTAAGACTTTAATTATACCTTCCAATGACCTTGTACAAGTTATAGCAAAGGATGTTTCTGTTTTCAGAGATGGCCAAACTAGTGCACCTCACTATGATGACATGCATCATGAGATCATGGTTGATTCAGTAATATCTCAATCTCGACATGTTGAGACAGGCAGAGAATTACAGCGATGGGTACCTGATGAAGATGATCCAGAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACGAACAAAATGTTATTCGGTGTAAAAAGCACATTCAATGAGGAGTTATATACAACAAAACTTGAAAAAGGGCCGCAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATTGCAAGAGAAATTGAGGGTGAGGAAACCCAAGATCTCCATCTAGCAGAGGAAAGAGGCCTTTACCATAACTTTGATATTGATGAAGAAACCAGATTCTCTTCAGTCTATAGGGGTAACACTGTTGATGATAGTGGATATGACGAAAATGAGGATAAGTTGTTGGATTCGGATTCACACAATTCTGAAAGGTTTGATAATATTTATGGTTTAGTCATCAAGAGACCAGGTGAAGTTAGTGGTCAGAAAGGCAATAATGGAGCTCAAAAATTGGCAAATTTCTCCTCTGTGGTACCTCCTCAACCAGTTATATATGTATTATATTTTAGTTAG 1092 0.391 MNLEQIGQPKSSNGYIRRKSEKDGATKSDYKIPSGKSNASSRLPSTGVVSDNKGGSYGSPSHDRLVYLTSCLIGQHVEAQVKNGSIYSGIFHATNTDKDYGIILKMACLTKDGSLQGQRFRVESFSKAPSKTLIIPSNDLVQVIAKDVSVFRDGQTSAPHYDDMHHEIMVDSVISQSRHVETGRELQRWVPDEDDPECPELENIFDGPWNRGWDQFETNKMLFGVKSTFNEELYTTKLEKGPQTRELEKQALRIAREIEGEETQDLHLAEERGLYHNFDIDEETRFSSVYRGNTVDDSGYDENEDKLLDSDSHNSERFDNIYGLVIKRPGEVSGQKGNNGAQKLANFSSVVPPQPVIYVLYFS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1383 363 Coils Coil 244 264 - -
Pvu10g1383 363 MobiDBLite consensus disorder prediction 1 56 - -
Pvu10g1383 363 MobiDBLite consensus disorder prediction 292 312 - -
Pvu10g1383 363 MobiDBLite consensus disorder prediction 15 29 - -
Pvu10g1383 363 MobiDBLite consensus disorder prediction 297 312 - -
Pvu10g1383 363 Pfam Ataxin 2 SM domain 62 146 IPR025852 -
Pvu10g1383 363 MobiDBLite consensus disorder prediction 31 56 - -
Pvu10g1383 363 PANTHER ATAXIN-2 HOMOLOG 9 349 - -
Pvu10g1383 363 SMART LsmAD_2 223 292 IPR009604 -
Pvu10g1383 363 PANTHER ATAXIN 2-RELATED 9 349 IPR045117 GO:0003723
Pvu10g1383 363 Pfam LsmAD domain 223 291 IPR009604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1383 Pvu-Chr10 40362471 40369237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1383 - - pvu:PHAVU_010G133000g 725.702