Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1380 ATGTTTAGTTCATCAGGCATGGCAGATGGATCTGGTATGTTCAAGGTTCATCAAACAATTGGCAGTGTTTTGTGTTGCAAGTGTGGAATTCCAATGCAGCCAAATGCTGCTAATATGTGTGTGAAGTGTTTGAGCTCGGAAGTTGACATTACTGAAGGATTACTGAAGCGGTTAGTGCTGGTGCATTGCCCTGAGTGTGAGAGTTACTTGCAGCCACCAAGAAGTTGGGTCAAGTTACAGCTAGAATCAAAGGAGCTGCTGACATTTTGCTTGAAGAAATTGCAGAAAAATTTTAATTCGAGTAAAGTGAGGTTGGTACATGCCGAGTTTATTTGGACTGAACCCCATTCCAGGAGGGTAAAAGTGAAGGTCAAGGTTCAGAAGGAGGTTATCAATGGAGCAATTCTTGAACAGGCTTATACTGTGGAGTATGTTCAACAAGAGCATATGTGTGAATCCTGTTCTAGGGTCCAGGCTAATCCTGACCAGTGGGTTGCTGCTGTGCAACTTAGACAACATGTTTCTCATAGGCGTACTTTCTTTTATCTAGAGCAGCTAATTCTGAAGCATGGTGCTGCTGCCAGTGCTATAAGAATCAAGCAGATGGAACAAGGTATTGACTTCTTCTTCTCCAATCGAAGTCATGGAGTTAAATTTGTGGAGTTTGTAGGGAAAGTTGCTCCTGCAAGGAGCCGCAGTGATAAGCAGCTAGTTTCCCATGATCCAAAGAGTAATAACTACAACTACAAATATACATTTTCTGTTGAACTCAGCCCCATTTGCCGTGAGGATTTAATCTGTCTGCCTCCAAAAGTTGCTGTTAGTTTGGGAAATATTGGTCCTATTGTGATTTGCACTAAGGTTACCAACAGCATTGCTCTGCTTGATCCATTTACCTTGAGGCACTGTTTCTTAGATGCTGATCAATACTGGAGAACATCCTTCAAGTCATTACTTACTAGCAGACAGTTAGTGGAATATATAGTGTTGGATATGGAGTTTATTTCATCTGAGGTTACTATTGGTGGCACAAAATATCGCTTAGCAGAGGCTCAAGTTGCTCGTGTGTCAGATTTTGGCAAGAACGACACAATATTTAACATCAAGACTCATCTGGGCCATCTTTTAAATCCTGGTGATAATGCTCTTGGTTATGATCTGTATGGAGCTAATAGTAATGACATGGAGCTGGACAAGTACAAAGGGCACATTCCTGAAGCAATTTTAATAAAGAAGAGTTATGAAGAGAAGCGCCAAAAGAAACGGGGGAAGCCTCGATCATGGAAGCTGAAATCACTTGAAATGGAGGTTGATGATAGGAAACTTGATCAAGACAAAATGCTCTCAGAATATGAACAATTCTTGAAAGATTTGGAAGAAAACCCTGATATGAGGTTCAACATATCACTGTACCGAAACAAGGAGTACCAGCCATCAGAGATGGCATCGGTGACTGATGGTGATGAGCTACCTTCTGTTCCACTGGATGAATTACTGGCTGATCTTGATCTGAGTGGAGGTGAAGATGAAGATGAAGAAGATGACATGACAGAATGA 1557 0.4149 MFSSSGMADGSGMFKVHQTIGSVLCCKCGIPMQPNAANMCVKCLSSEVDITEGLLKRLVLVHCPECESYLQPPRSWVKLQLESKELLTFCLKKLQKNFNSSKVRLVHAEFIWTEPHSRRVKVKVKVQKEVINGAILEQAYTVEYVQQEHMCESCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILKHGAAASAIRIKQMEQGIDFFFSNRSHGVKFVEFVGKVAPARSRSDKQLVSHDPKSNNYNYKYTFSVELSPICREDLICLPPKVAVSLGNIGPIVICTKVTNSIALLDPFTLRHCFLDADQYWRTSFKSLLTSRQLVEYIVLDMEFISSEVTIGGTKYRLAEAQVARVSDFGKNDTIFNIKTHLGHLLNPGDNALGYDLYGANSNDMELDKYKGHIPEAILIKKSYEEKRQKKRGKPRSWKLKSLEMEVDDRKLDQDKMLSEYEQFLKDLEENPDMRFNISLYRNKEYQPSEMASVTDGDELPSVPLDELLADLDLSGGEDEDEEDDMTE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1380 518 Pfam NMD3 family 25 257 IPR007064 -
Pvu10g1380 518 PANTHER 60S RIBOSOMAL EXPORT PROTEIN NMD3 7 511 - -
Pvu10g1380 518 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 7 511 IPR039768 GO:0043023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1380 K07562 - gmx:100799026 907.516