Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1377 ATGAGTTTTCTGTTCGGCAATAGAAAGACTCCCGCTGAGCTTTTGAGGGAGAACAAAAGAATGCTGGACAAGTCCATTAGAGAAATTGAAAGGGAAAGGCAAGGCTTGCAGAATCAAGAAAAGAAGTTGATTGTGGAGATTAAGAAGAATGCCAAACAAGGGCAGATGGGGGCAGTGAAAATGATGGCCAAGGATCTCATCAGGACTCGCCATCAGATTGACAAGTTTTACAAGCTCAAATCGCAACTTCAGGGTGTTTCCTTGAGAATTCAGACACTAAAATCCACTCAAGTAATGGGGGAGGCTATGAAAGGAGTTACTAAAGCAATGGGTCAAATGAATAGGCAGATGAATTTGCCTTCGTTACAGAAGATAATGCAAGAGTTTGAAAGGCAGAATGAGAAGATGGAACTGGTTTCTGAGGTAATGGAAGATGCAATTGACGATGCTTTGGAAGGTGATGAAGAGGAGGAAGAGACAGAAAATCTTGTCAATCAAGTTCTCGATGAGATCGGAATCGATATCAACTCTGAGCTTCTGAATGCACCTGCATCAACCTCTGTCACTACTGCACCAGCAGCAAATAACAGGGTTGCTCAAGCTGAATCAACCGGCCATGAAGACAGTGGAATAGATGACGATCTACAGGCTAGGTTAAATAATCTGAGAAAGATGTGA 678 0.4263 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMEDAIDDALEGDEEEEETENLVNQVLDEIGIDINSELLNAPASTSVTTAPAANNRVAQAESTGHEDSGIDDDLQARLNNLRKM* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1377 225 Pfam Snf7 17 184 IPR005024 GO:0007034
Pvu10g1377 225 Gene3D - 6 180 - -
Pvu10g1377 225 Coils Coil 119 146 - -
Pvu10g1377 225 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 225 - -
Pvu10g1377 225 Coils Coil 12 46 - -
Pvu10g1377 225 MobiDBLite consensus disorder prediction 186 203 - -
Pvu10g1377 225 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 225 IPR005024 GO:0007034
Pvu10g1377 225 MobiDBLite consensus disorder prediction 186 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1377 Pvu-Chr10 40279532 40281371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1377 K12191 - qsu:111998886 349.362