Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1373 TTGTGGGTTCCACTGACATCTTCTGCTTCTTCCACTCACACTCTTCAATCAAACTACGATGTCTTTGTTAGCTTTAGAGGTCCAGATGTTCGTGTAGGTTTCCTTAGCCATTTGATTGAGGCACTTTCTCTAAACCAGATTGTTTCCTTCGTAGATTACAATATTCCCAAAGGACATCAAATATCTGATGCACTTCTAAGAGCAATTGAAGTATCATCTATTTATTTGATTATATTTTCAGAAAACTATGCTTCTTCAAGCTGGTGTTTGTTAGAACTTGTAAAAACTGTTGAGTGTCGTAGAAAATATGGACACATGTTGCTACCTATTTTCTACAAAGTAGATCCTTCAGATATACGACATCAGAGGGGAAGTTATGGAGAGGCGTTTATTGCTCATGAAAGAGAGTACAATCTGACCACAGTGCAAACATGGAGATATGCTTTGAAGGAATCTGCTAATCTAGCAGGATTTGTTTCATCTACTTTTAGGTTAGATGATGCTGAGCTTGTTAAAGAGATTGTTAAATCTGTGTTGAATCTCAGACATAAAGTTAATTCTAAAGAGGAGTATGAAATTGATACACAGTTTCCACATGCAGAACCATTGCTGGATCTTCCAGTTACTAGATGTATGG 637 0.3689 LWVPLTSSASSTHTLQSNYDVFVSFRGPDVRVGFLSHLIEALSLNQIVSFVDYNIPKGHQISDALLRAIEVSSIYLIIFSENYASSSWCLLELVKTVECRRKYGHMLLPIFYKVDPSDIRHQRGSYGEAFIAHEREYNLTTVQTWRYALKESANLAGFVSSTFRLDDAELVKEIVKSVLNLRHKVNSKEEYEIDTQFPHAEPLLDLPVTRCM 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1373 212 Pfam TIR domain 18 187 IPR000157 GO:0007165
Pvu10g1373 212 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 13 185 - -
Pvu10g1373 212 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Pvu10g1373 212 PANTHER TMV RESISTANCE PROTEIN N-LIKE 13 185 - -
Pvu10g1373 212 Gene3D - 16 188 IPR035897 -
Pvu10g1373 212 ProSiteProfiles TIR domain profile. 17 182 IPR000157 GO:0007165
Pvu10g1373 212 SMART till_3 18 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1373 Pvu-Chr10 40240972 40241720 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1373 21 192 Miscellaneous Gene Families AT1G57670 35.465 7.32e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1373 - - pvu:PHAVU_010G131600g 405.986