Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1370 ATGCCTTACACTTATTCTTCTCGCGTTTCTAATATAATCGCATTTTTTCTATTTCTTTCTCTCTTCCTGGAAAAGCCAACAGTAGAAAATAGTTTGTGGTGTCCACTGACATCTTCTGCTTCTTCCAATGACACCCTTCAATCAAAGTATGATGTCTTTGTTAGCTTTAGAGGTCCAGATGTTCGTGTAGGTTTCCTTAGCCATTTGATCGATGCACTTTCTCTAAACCAGATTGCTTCCTTTGTAGATTACAACATTCCCAAAGGACATCAAATATCTGATGCACTTCTAAGAGCAATTCAAGTATCATCTATTTATTTGATTATTTTTTCAGAAAACTATGCTTCTTCGAGCTGGTGTTTGTTAGAACTTGTGAAAATTGTTGAGTGTAGTGGAAAATATGGACACATGTTGCTACCTATTTTCTACCAAGTAGATCCTTCAGATGTGCGACATCAGAGGGGAATTTATGGAGAGGCCTTTGTTGCTCATGAAAGAGAATACAATCTGACCACAGTGCAAACCTGGAGATTTGCTTTGAAGGAATCTGCAAATGTAGCTGGATTTCATTCATCTACTTTTCGTTCGAACTTGAAGTTTCAAAATAATTATAATGGAGGTGGTGTTGATATATATTATTTTGAATTTTGCAGGGATGATGCTAAGCTTGTTAAAGAGATTGTTAAATGTGTGTCGTCAATGGTGTTGAATCTCAGACATAAAGTTAATTCTAAAGAGCCGTACGAAATTGGTACACAGTTTCCACATGCAGAAACATTTCTACGGTTAAAGTCAGAAGATCTTCCAGTTATTGGATGTATTGAATATAGTCACTTGTTTCCTATCAATATTACTCTTAAGGAAATATGTTTAGAAAATCCAAGTGTTATTATTACTTAG 900 0.3533 MPYTYSSRVSNIIAFFLFLSLFLEKPTVENSLWCPLTSSASSNDTLQSKYDVFVSFRGPDVRVGFLSHLIDALSLNQIASFVDYNIPKGHQISDALLRAIQVSSIYLIIFSENYASSSWCLLELVKIVECSGKYGHMLLPIFYQVDPSDVRHQRGIYGEAFVAHEREYNLTTVQTWRFALKESANVAGFHSSTFRSNLKFQNNYNGGGVDIYYFEFCRDDAKLVKEIVKCVSSMVLNLRHKVNSKEPYEIGTQFPHAETFLRLKSEDLPVIGCIEYSHLFPINITLKEICLENPSVIIT* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1370 299 Pfam TIR domain 49 238 IPR000157 GO:0007165
Pvu10g1370 299 PANTHER TMV RESISTANCE PROTEIN N-LIKE 35 201 - -
Pvu10g1370 299 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 35 201 - -
Pvu10g1370 299 Gene3D - 47 242 IPR035897 -
Pvu10g1370 299 ProSiteProfiles TIR domain profile. 48 235 IPR000157 GO:0007165
Pvu10g1370 299 SUPERFAMILY Toll/Interleukin receptor TIR domain 40 189 IPR035897 -
Pvu10g1370 299 SMART till_3 49 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1370 Pvu-Chr10 40228022 40230104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1370 52 200 Miscellaneous Gene Families AT1G57670 38.926 6.34e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1370 - - pvu:PHAVU_010G131800g 601.282