Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1369 ATGTGTTTCCAAGTTTCTCATAGAATCAAATATGTTGTATTCATTTGTCTGGTGTTTGTAACATCTTCTACTTGTTCCAATCACACTTCTCAAATCAAGGTACGATGTTTCCTCAGCCATTTGATTGAGGCATTTTCTCAGAAGCAAATTGCTTTCTTCGCAGATGATAACATTCAGAAAAGGGAAGATCTATATGAAGCACTATTAGGAGCCATTGAAGAATCATTAATTTCTTTGGTTATATTTTCAGAAAACTATGCTTCTTCGAGATGGTGTTTGTTAGAGCTTGAGAAAATTTTGGAGTGCAGGAGAAAGAATGGACAAATTGCAGTGCCTATTTTCTACAAAGTAGATCCTTCAGACGTTCGACATCAAAGGAGGAGTTATGGTGATGCTTTTGTTAAACATGAAAGAAACTATTCCTTCACTGTGCAAAGATGGCGATCTACTTTGAGTGAATCTGCTAATCTATCAGGATTTCATTCATCAATTTTT 495 0.3535 MCFQVSHRIKYVVFICLVFVTSSTCSNHTSQIKVRCFLSHLIEAFSQKQIAFFADDNIQKREDLYEALLGAIEESLISLVIFSENYASSRWCLLELEKILECRRKNGQIAVPIFYKVDPSDVRHQRRSYGDAFVKHERNYSFTVQRWRSTLSESANLSGFHSSIF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1369 165 Pfam TIR domain 10 153 IPR000157 GO:0007165
Pvu10g1369 165 SUPERFAMILY Toll/Interleukin receptor TIR domain 36 160 IPR035897 -
Pvu10g1369 165 SMART till_3 10 157 IPR000157 GO:0007165
Pvu10g1369 165 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 9 163 - -
Pvu10g1369 165 PANTHER TMV RESISTANCE PROTEIN N-LIKE 9 163 - -
Pvu10g1369 165 ProSiteProfiles TIR domain profile. 20 165 IPR000157 GO:0007165
Pvu10g1369 165 Gene3D - 5 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1369 Pvu-Chr10 40202673 40203204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1369 37 163 Miscellaneous Gene Families AT5G44900 35.878 9.09e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1369 - - pvu:PHAVU_010G131900g 286.574