Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1368 ATGCCTTACTGTGTTTGGATTCCACTGACATCTTCTTCTCCTTCTTCCACTCACACCCTTCAATCAAACTACCATGTCTTTGTTAGCTTTAGAGGTCCAGATGTTCGCGTAGGTTTCCTTAGCCATTTGATTGAGGCACTTTCTCTAAACCAGATTGTTTCCTTTGTAGATTACAATATTCCGAAAGGACATCAAATATCTGATGCACTTCTAAGAGCAATTGAAGTATCATCTATTTATTTGATTATATTTTCAGAAAACTATGCTTCTTCAAGCTGGTGTTTGTTAGAACTTGTAAAAACTGTTGAGTGTCGTAGAAAATATGGACACATGTTGCTACCTATTTTCTACAAAGTAGATCCTTCAGATGTACGACATCAGAGGGGAAGTTATGGAGAGGCCTTTATTGCTCATGAAAGAGAGTACAATCTGAACACAGTGCAAACATGGAGATATGCTTTGAAGGAATCTGCTAATCTAGCAGGATTTGTTTCATCTACTTTTAGGGATGATGCTGAGCTTGTTAAAGAGATTGTTAAATCTGTGTTGAATCTCAGGCATAAAGTTAATTCTAAAGAAGAGTATGAAATTGATACACAGTTTCCACATGCAGAACCATTGCTAGATTTTCCAGTTACTAGATGTATG 648 0.3673 MPYCVWIPLTSSSPSSTHTLQSNYHVFVSFRGPDVRVGFLSHLIEALSLNQIVSFVDYNIPKGHQISDALLRAIEVSSIYLIIFSENYASSSWCLLELVKTVECRRKYGHMLLPIFYKVDPSDVRHQRGSYGEAFIAHEREYNLNTVQTWRYALKESANLAGFVSSTFRDDAELVKEIVKSVLNLRHKVNSKEEYEIDTQFPHAEPLLDFPVTRCM 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1368 216 Pfam TIR domain 23 192 IPR000157 GO:0007165
Pvu10g1368 216 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 163 IPR035897 -
Pvu10g1368 216 SMART till_3 23 160 IPR000157 GO:0007165
Pvu10g1368 216 Gene3D - 21 192 IPR035897 -
Pvu10g1368 216 PANTHER TMV RESISTANCE PROTEIN N-LIKE 18 189 - -
Pvu10g1368 216 ProSiteProfiles TIR domain profile. 22 186 IPR000157 GO:0007165
Pvu10g1368 216 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 18 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1368 Pvu-Chr10 40196814 40197673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1368 25 196 Miscellaneous Gene Families AT1G57670 36.047 4.64e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1368 - - pvu:PHAVU_010G131600g 436.802