Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1362 ATGAGCTCGGATATTAATGAATTATATAGAAGAGTTATCTATCAGAATAATACTCTTAATGATCTATTAACAACAAGTAGATCTACTCCAGGAGAATTAGTAATATGTCAGGAGAAATTGGTACAAGAAGCCGTGGATACACTTCTTGATAATGGAATCCGCGGACAGCCGATGAGGGATGGTCATAATAAGGTTTACAAATCATTTTCTGATATAATCGAGGGCAAAAAGAGAAGATTTCGCGAGACCCTACTTGGGAAACGAGTTGATTATTCGAGTCGTTCTGTCATTATCGTAGGTCCATCACTTTTATTACATAGATGTGGATTGCCCGACGAAATAGCAATAGAACTTTTCCAGACATTTCTAATTCGTGGTCTAATTCGAAAACATTTTGCCGCGTAA 405 0.3704 MSSDINELYRRVIYQNNTLNDLLTTSRSTPGELVICQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKKRRFRETLLGKRVDYSSRSVIIVGPSLLLHRCGLPDEIAIELFQTFLIRGLIRKHFAA* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1362 134 PANTHER DNA-DIRECTED RNA POLYMERASE 1 133 IPR045867 GO:0003899|GO:0006351
Pvu10g1362 134 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' 1 133 - -
Pvu10g1362 134 Pfam RNA polymerase Rpb1, domain 2 86 131 IPR000722 GO:0003677|GO:0003899|GO:0006351
Pvu10g1362 134 Gene3D - 74 131 - -
Pvu10g1362 134 SMART rpolaneu7 2 134 IPR006592 GO:0003677|GO:0003899|GO:0006351
Pvu10g1362 134 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 2 131 - -
Pvu10g1362 134 Pfam RNA polymerase Rpb1, domain 1 2 84 IPR007080 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1362 Pvu-Chr10 40137285 40137724 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1362 K03046 - mtr:MTR_4g051130 247.669