Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1360 ATGGGCTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCGCCTACAGAGGATAATGACGGTAGAGATGGTATTGTCTGCATCCAGCCCCAAAAGACACACCCATCGACAAATCCCCATGCTTCTGATTTATTTCCAACATCAACTGCTGCCCAAGGAATAATAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCCACTGGTGTGCCTGAATCAGATGCTGAATTGAAGAGAGTAGGAGATCAGGACACAAAGGTTTCCTCCAAGTCAAGTAAAGATGAAGATGTGAAAGTTATGGATTCACGGATACTAAGTTCAACAAATGCCCAATCTACTGAGAGGGAAGAAGGGGAATGGTCTGATGAGGACGTTTTTGCTAATGCAAATGGAGGTAATAATCCTAAAGCAAATGGAGGTAATAATCCTAATGCAAATGGGGGTAATAATGCTAATGCAAATGTAGGTAATAATTTGCCACAACGAGGTCAAGCTTCAGAAGAGCTAGCAACATCTGGAATGGTGGATGTGAGTCTTCTGGTTGCGTCTGACAGTAAACCTAGAAATATTAAGAGTTCTGATAGTATAAATGATGAAAGGGGTAGTCATGCTTCTATAGGTCTAGAATCAAATTCGAGTGAGCAGAAAAACAATAGTATTCCAAATTCAGAAAGCAATATAAAAAGTGAAACCTCTAGTGATGCACTGGAGGAACCCACTTTAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCACTTAGGTGTGCAAATAATCCAGGTAAGAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGAAATAGACAGACAATGTTTCTTAACTTAGAAGATGTTAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAAACTTTCTCATCATCATCTGTTGTTAGTCGAACAATAAAGGAAGTCCGCACTATTCCCGCACAAGTTGAGCGTGTTGGAATAGCTAAGGATCAGAAGCTCACTGATACATCTTCTGGTGAAGGTGGCAACCATGCTGAAGCACAAGAACCTAAATCTTCTGATTGTAATGGCGATACTTCTGGACCACTTGTTAGATCCAGGAGGTTAAACAGTGAGGCAGAACCTTCTGCAGAGGCCAATTTGCCACCAATTCCAAGACAGGGTTCATGGAAACAATTGACAGATTCAAGGCAGCAGAAGAACGCACTCCATTCTAATAGGAAGTTGGGACTGAGTAGTCAAAGTTCTAATGATGTTAAATTAGGAAACAAGAAACATCTTTCTATCAAGAAGCAGGCTCCTATCAGCAGCCAGTCCCAGGACACATCTGTTGAGCGCCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGAGACTGAGCTTCAGTGTGTTCCTGGACGGTTTGAATCAGTGGAAGAGTATGTTAGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTATAGTACTTGGGAAGAATCAACTGAAACAGTGTCAAGGGATACTCATATTATGGTGCGTGTGAAGGCGAATGAGTCAAGGGAAAGAGGATGGTATGATGTTAAAGTTCTTCCAGTACATGAGTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCATCCCCCAGGCCTGGATCAGTTAGATCCAAGCAGAACAGTTCATCTGTAGCTCAGGATGACGGGGAATCAGAAGTCACTGGACGAGTGGTTGGTACAGTTAGGCGTCACATACCTATTGATACCCGTGATCCTCCTGGTGCAATTCTTCATTACTATGTTGGAGACTCTTATGATCCCAGCAGGGTTGATGATGATCATATCATAAGAAAGCTTCTAAGTGGAAGCATCTGGTACCTCACTGTTCTCGGTTCTCTTGCTACCACACAAAGGGAGTATGTTGCCCTACATGCATTTCGTCGATTAAATTTGCAGATGCAAACTGCAATCCTTCAGCCTAGTCCTGAACACTTCCCTAAATATGAGCAACAGACCCCAGCCATGCCTGAATGCTTCACTCAGAACTTTGTTGAGTATCTGCGTAGGACCTTCAATGAACCCCAGTTAGCAGCAATCCAATGGGCAGCTACGCATACAGCTGCTGGCACAAGTAGTGGATCAACAAAAAGGCAAGAACCTTGGCCATTTACCCTCGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTGTGGGGAATGTTGAATGTCATTCACCTTGTTCAGTATCAGCACTACTACACCTCTTTGCTAAAGCATGTAGCCCCTGAGAGCTACAAGCAAGTCAATGAGATTAATTCTGATCATATCCCCACTGGATCTATTGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACCTTACCTAAACTGGTCCCAAAACCTAGAATGTTAGTCTGTGCTCCGTCTAATGCTGCCACTGATGAGCTTCTTGCCCGTGTTCTTGATCGTGGATTTATTGATGGGGAGATGAAAGTTTATCGACCTGATGTAGCTCGAGTTGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCTGTCGAGCGCAGAACTGAACAGCTTTTAATCAAGAGTCGAGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGCGAGGCGCAGTTGACTCAGCAGTTGCATTGTCTTCATAGAGAACTTAATGCAGCTGCTGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCCGAGATCAGAATCGAGATGCTTTGCTGCAGAACCTTGCTGCAGTTGTTGAAAATCGGGACAAGGTTCTGGTTGAGATGTCTCGCCTAGCCCTTCTTGAAAGTAGGTTTCGACCTGGTAGTGGATTTAATTTGGAAGAAGCCCGTGCTAGTTTGGAGGCCAGTTTTGCAAATGAAGCAGAGATTGTTTTCACTACAGTTTCTAGCAGTGGCCGTAAGTTGTTTTCTCGCCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGCAATTCTGCCTCCCCTCTCTCTTGGTGCAGCTCGTTGTGTCCTTGTTGGAGATCCTCAACAGCTTCCCGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTCGAAAGGTTCCAACAAGCAGGTTGCCCGACAATGTTGTTGTCTGTGCAGTACAGAATGCACCCTCATATTCGGGATTTCCCTTCTAGGTACTTCTATCAGGGGCGCCTTACTGATAGTGAAAGTGTCGTTAAACTGCCTGACGAGCCATACTACAAGGACCCTTTACTTAAACCTTATATATTCTATGATATCAGACATGGGCGTGAATCTCACAGAGGTGGATCAGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCAGATTGTATGAGCATGTTCAGAAAACGGTCAAGTCTTTGGGTGTAGGAAAAATTACTGTTGGCATAATTACTCCTTATAAGCTGCAGTTGAAATGCCTCCAGCGTGAGTTTGAAGAAGTGTTAAATTCAGAAGAAGGGAAAGATCTATATATCAATACCGTAGATGCCTTCCAAGGTCAAGAACGGGATGTCATTATAATGTCTTGTGTGCGTGCATCTAGTCATGGTGTTGGCTTTGTTGCAGATATTCGGCGGATGAATGTTGCCCTTACACGTGCAAGAAGGGCCCTCTGGGTCATGGGAAATGCGAATGCTCTGGTGCAATCTGAAGATTGGGCTGCATTGATTAATGATGCAAAATCTCGAAAATGCTATATGGACATGGACTCTCTTCCTAAAGACTTCCTGGTGTCCAAGGGACCTGTTTACACATCATTGCCCAAGCCTTCTTCAAATATGAGGGGCATGAGATCGGCTGGACCAAGATATAGATCAATGGATATGCATATGGAGTCCAGGTCGGGAGCACCATCTGAAGATGACGAGAATATGGGTGCTCCAATTGGCTCTAGAAACGGGAACCATCGCCAATCACGGTTTTCAATGGAGAATTCCTTCGATGATTTTGATCACGGGGGTGACAAATCCAGAGATTCTTGGCAGTATGGTATACAGAAGAAACAGAACTCATCTGGACCCATGGGAAAGAGAGACGTATAA 4200 0.4393 MGSRGRPLFDLNEPPTEDNDGRDGIVCIQPQKTHPSTNPHASDLFPTSTAAQGIINNHAFSHASSVSGFQPFVRPKSTGVPESDAELKRVGDQDTKVSSKSSKDEDVKVMDSRILSSTNAQSTEREEGEWSDEDVFANANGGNNPKANGGNNPNANGGNNANANVGNNLPQRGQASEELATSGMVDVSLLVASDSKPRNIKSSDSINDERGSHASIGLESNSSEQKNNSIPNSESNIKSETSSDALEEPTLVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQTFSSSSVVSRTIKEVRTIPAQVERVGIAKDQKLTDTSSGEGGNHAEAQEPKSSDCNGDTSGPLVRSRRLNSEAEPSAEANLPPIPRQGSWKQLTDSRQQKNALHSNRKLGLSSQSSNDVKLGNKKHLSIKKQAPISSQSQDTSVERLIREVTSEKFWHHPEETELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNSSSVAQDDGESEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVALHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDHIPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCLHRELNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQNLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVVKLPDEPYYKDPLLKPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRKCYMDMDSLPKDFLVSKGPVYTSLPKPSSNMRGMRSAGPRYRSMDMHMESRSGAPSEDDENMGAPIGSRNGNHRQSRFSMENSFDDFDHGGDKSRDSWQYGIQKKQNSSGPMGKRDV* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 137 178 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 214 248 - -
Pvu10g1360 1399 Gene3D - 644 1088 IPR027417 -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 569 586 - -
Pvu10g1360 1399 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 1355 - -
Pvu10g1360 1399 CDD DEXXQc_SETX 708 1090 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 343 436 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 567 592 - -
Pvu10g1360 1399 Gene3D - 1089 1295 IPR027417 -
Pvu10g1360 1399 PANTHER DNA2/NAM7 HELICASE FAMILY 1 1355 IPR045055 -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 272 296 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 1 24 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 309 326 - -
Pvu10g1360 1399 Pfam AAA domain 708 1060 IPR041677 GO:0004386
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 81 111 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 1329 1399 - -
Pvu10g1360 1399 Pfam AAA domain 1067 1263 IPR041679 -
Pvu10g1360 1399 CDD SF1_C_Upf1 1091 1280 IPR041679 -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 347 382 - -
Pvu10g1360 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 707 1292 IPR027417 -
Pvu10g1360 1399 Coils Coil 893 913 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 1361 1381 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 72 326 - -
Pvu10g1360 1399 MobiDBLite consensus disorder prediction 403 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1360 Pvu-Chr10 40107464 40115394 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1360 - K10706 gmx:100794516 2504.94